Integrative Orthology Viewer: AT4G38740 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT2G16600 AT4G38740 | 2 | |
Tree-based ortholog | AT4G38740 | 1 | ||
Anchor point | AT2G21130 AT2G16600 AT4G34870 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | AT4G38740 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-many | ATR_00041G01750 ATR_00009G01080 | 2 | |
Anchor point | many-to-1 | ATR_00041G01750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00041G01750 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL3G37150 AL7G00600 | 2 | |
Tree-based ortholog | 1-to-1 | AL7G00600 | 1 | ||
Anchor point | many-to-many | AL7G00600 AL7G06000 AL4G00230 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G00600 | 1 | ||
Beta vulgaris | Tree-based ortholog | 1-to-many | BV9G02740 BV0G42160 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV9G02740 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR08G20270 BR09G08690 | 2 | |
Tree-based ortholog | 1-to-1 | BR08G20270 | 1 | ||
Anchor point | many-to-many | BR06G39700 BR01G03280 BR08G20270 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR08G20270 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_003G29220 CRU_007G00580 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_007G00580 | 1 | ||
Anchor point | many-to-many | CRU_004G00150 CRU_007G00580 CRU_007G05030 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G00580 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00037G01810 | 1 | |
Tree-based ortholog | 1-to-many | CP00026G00540 CP00037G01810 CP00162G00170 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00026G00540 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR01G00540 | 1 | |
Tree-based ortholog | 1-to-many | CR01G08110 CR13G05920 CR12G11110 ... | 23 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR01G00540 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL02G04430 | 1 | |
Tree-based ortholog | 1-to-1 | CL02G04430 | 1 | ||
Anchor point | many-to-1 | CL02G04430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G04430 | 1 | ||
Citrus sinensis | Tree-based ortholog | 1-to-many | CS02647G00010 CS00222G00080 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS02647G00010 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00019G02830 | 1 | |
Tree-based ortholog | 1-to-1 | CM00019G02830 | 1 | ||
Anchor point | many-to-1 | CM00019G02830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00019G02830 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0006G13570 EG0006G21910 | 2 | |
Tree-based ortholog | 1-to-many | EG0006G13570 EG0006G21910 EG0878G00020 ... | 4 | ||
Anchor point | many-to-many | EG0006G13570 EG0009G11360 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0006G13570 EG0006G21910 | 2 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV2G06590 | 1 | |
Tree-based ortholog | 1-to-many | FV2G06590 FV0G26080 FV4G07880 | 3 | ||
Anchor point | many-to-1 | FV2G06590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G06590 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM04G00700 GM11G10480 GM12G02790 | 3 | |
Tree-based ortholog | 1-to-many | GM12G02790 GM04G00700 GM06G00740 ... | 6 | ||
Anchor point | many-to-1 | GM12G02790 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM12G02790 GM04G00700 GM06G00740 | 3 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR02G00380 GR08G03410 | 2 | |
Tree-based ortholog | 1-to-many | GR02G19360 GR12G15310 GR02G00380 ... | 6 | ||
Anchor point | many-to-many | GR02G19360 GR12G15310 GR08G03410 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR12G15320 GR08G03410 | 2 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G042700 LJ3G049380 | 2 | |
Tree-based ortholog | 1-to-many | LJ1G042700 LJ3G049380 LJ3G049390 | 3 | ||
Anchor point | many-to-1 | LJ1G042700 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G049380 | 1 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD00G467440 | 1 | |
Tree-based ortholog | 1-to-many | MD00G467440 MD04G018690 MD12G024160 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD12G024160 MD04G018690 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME02943G00290 ME11638G00010 | 2 | |
Tree-based ortholog | 1-to-many | ME07012G00440 ME02943G00290 ME11638G00010 ... | 5 | ||
Anchor point | many-to-1 | ME07012G00440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME11638G00010 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT4G075290 | 1 | |
Tree-based ortholog | 1-to-many | MT4G075290 MT3G117750 MT7G116340 | 3 | ||
Anchor point | many-to-1 | MT3G117750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G075290 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS02G02890 | 1 | |
Tree-based ortholog | 1-to-1 | OS09G39780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G02890 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | 1-to-many | OL09G01230 OL06G02070 OL08G04020 ... | 18 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OL03G04290 OL08G04020 | 2 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00249G00350 | 1 | |
Tree-based ortholog | 1-to-many | PP00071G00470 PP00232G00310 PP00046G00430 ... | 32 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00249G00350 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT04G16880 PT09G13010 | 2 | |
Tree-based ortholog | 1-to-many | PT05G24020 PT02G02150 PT09G13010 ... | 5 | ||
Anchor point | many-to-many | PT09G13010 PT04G16880 PT05G24020 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT09G13010 PT04G16880 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_008G17870 | 1 | |
Tree-based ortholog | 1-to-many | PPE_008G17870 PPE_006G35220 | 2 | ||
Anchor point | many-to-1 | PPE_008G17870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G17870 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30170G05510 | 1 | |
Tree-based ortholog | 1-to-many | RC30170G05510 RC29680G00180 | 2 | ||
Anchor point | many-to-many | RC30131G03070 RC30170G05510 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30170G05510 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G111170 SL10G054910 | 2 | |
Tree-based ortholog | 1-to-many | SL01G111170 SL10G054910 SL11G006070 | 3 | ||
Anchor point | many-to-many | SL01G111170 SL10G054910 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | SL01G111170 SL10G054910 | 2 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST01G048580 | 1 | |
Tree-based ortholog | 1-to-many | ST01G048580 ST11G005370 | 2 | ||
Anchor point | many-to-1 | ST01G048580 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G048580 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP4G00280 TP7G32640 TP7G37060 | 3 | |
Tree-based ortholog | 1-to-1 | TP7G37060 | 1 | ||
Anchor point | many-to-many | TP4G00280 TP7G32640 TP7G37060 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G37060 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0002G06350 | 1 | |
Tree-based ortholog | 1-to-many | TC0002G06350 TC0005G27470 | 2 | ||
Anchor point | many-to-many | TC0002G06690 TC0002G06350 TC0002G06000 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G06350 | 1 | ||
Vitis vinifera | Tree-based ortholog | 1-to-many | VV13G12590 VV03G07200 VV04G08460 ... | 14 | |
Anchor point | many-to-many | VV18G10690 VV03G04920 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G01790 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM04G15720 ZM05G29530 | 2 | |
Tree-based ortholog | 1-to-1 | ZM07G02560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM04G15720 ZM05G29530 | 2 |