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Integrative Orthology Viewer:
AT4G38130
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT4G38130 AT5G35600 AT5G63110 | 3 |  |
| Tree-based ortholog | AT4G38130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT4G38130 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00009G01530 ATR_00068G00880 ATR_00083G00130 | 3 | |
| Tree-based ortholog | 1-to-1 | ATR_00009G01530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00009G01530 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL7G00030 AL8G29690 | 2 | |
| Tree-based ortholog | 1-to-1 | AL7G00030 | 1 | ||
| Anchor point | N/A | AL7G00030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G00030 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV9G14010 | 1 | |
| Tree-based ortholog | 1-to-1 | BV9G14010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV9G14010 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR01G40780 BR06G21260 BR09G06310 | 3 | |
| Tree-based ortholog | 1-to-1 | BR01G40780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G40780 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_005G13480 CRU_007G00020 | 2 | |
| Tree-based ortholog | 1-to-1 | CRU_007G00020 | 1 | ||
| Anchor point | N/A | CRU_007G00020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G00020 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00063G00390 CP00110G00120 | 2 | |
| Tree-based ortholog | 1-to-1 | CP00063G00390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00110G00120 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR09G04860 | 1 | |
| Tree-based ortholog | 1-to-many | CR11G02240 CR06G06370 CR16G10810 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR09G04860 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL02G03090 CL02G10660 CL02G22070 ... | 4 | |
| Tree-based ortholog | 1-to-1 | CL02G10660 | 1 | ||
| Anchor point | N/A | CL02G03090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G10660 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00020G00930 CS00023G02310 | 2 | |
| Tree-based ortholog | 1-to-1 | CS00023G02310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00023G02310 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00020G00190 CM00066G00470 CM00089G01220 | 3 | |
| Tree-based ortholog | 1-to-1 | CM00020G00190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00020G00190 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0010G03970 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0009G12820 | 1 | ||
| Anchor point | N/A | EG0009G12820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0009G12820 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV1G29720 FV2G12810 FV5G08210 | 3 | |
| Tree-based ortholog | 1-to-1 | FV2G12810 | 1 | ||
| Anchor point | N/A | FV2G12810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G12810 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM01G45660 GM04G36090 GM05G02540 ... | 8 | |
| Tree-based ortholog | 1-to-many | GM13G06010 GM06G00050 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM06G00050 GM13G06010 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-many | GR02G01480 GR05G21500 | 2 | |
| Anchor point | N/A | GR05G21500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR02G01480 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ1G004580 LJ4G027280 LJ4G027340 | 3 | |
| Tree-based ortholog | 1-to-many | LJ1G004580 LJ4G027280 LJ4G027340 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G027340 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G036650 MD00G138270 MD00G185280 ... | 7 | |
| Tree-based ortholog | 1-to-many | MD00G410750 MD05G017150 MD05G017170 ... | 11 | ||
| Anchor point | N/A | MD10G010510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G185280 MD10G010510 MD00G036650 ... | 4 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME04300G00090 ME09434G00050 | 2 | |
| Tree-based ortholog | 1-to-1 | ME04300G00090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME04300G00090 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT3G077160 MT3G118535 MT5G004640 | 3 | |
| Tree-based ortholog | 1-to-1 | MT3G118535 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G118535 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G12350 OS02G12380 OS06G38470 ... | 4 | |
| Tree-based ortholog | 1-to-many | OS02G12380 OS02G12350 OS06G38470 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G38470 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL02G03290 | 1 | |
| Tree-based ortholog | 1-to-1 | OL02G03290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL02G03290 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-1 | PP00180G00410 | 1 | |
| Tree-based ortholog | 1-to-many | PP00223G00280 PP00351G00090 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00351G00090 PP00223G00280 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT04G20980 PT09G17070 PT12G08380 ... | 4 | |
| Tree-based ortholog | 1-to-many | PT04G20980 PT09G17070 | 2 | ||
| Anchor point | N/A | PT04G20980 PT09G17070 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT04G20980 PT09G17070 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_005G17360 PPE_008G20070 | 2 | |
| Tree-based ortholog | 1-to-1 | PPE_008G20070 | 1 | ||
| Anchor point | N/A | PPE_008G20070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G20070 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC29659G00040 RC30147G05600 | 2 | |
| Tree-based ortholog | 1-to-1 | RC29659G00040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29659G00040 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G112410 SL06G071680 SL09G091440 | 3 | |
| Tree-based ortholog | 1-to-1 | SL09G091440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G091440 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST03G025770 ST06G029370 ST09G027750 ... | 4 | |
| Tree-based ortholog | 1-to-1 | ST09G027750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G027750 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP5G13800 TP7G37620 | 2 | |
| Tree-based ortholog | 1-to-1 | TP7G37620 | 1 | ||
| Anchor point | N/A | TP7G37620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G37620 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0002G14410 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0002G14410 | 1 | ||
| Anchor point | N/A | TC0002G14410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G14410 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV03G03060 VV14G07190 VV17G01160 | 3 | |
| Tree-based ortholog | 1-to-many | VV03G03060 VV14G07190 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G07190 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM04G12090 ZM04G37550 ZM05G27510 ... | 4 | |
| Tree-based ortholog | 1-to-many | ZM05G27510 ZM04G37550 ZM09G12890 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM04G37550 | 1 |