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Integrative Orthology Viewer:
AT4G28680
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT2G20340 AT4G28680 | 2 |  |
| Tree-based ortholog | AT4G28680 | 1 | ||
| Anchor point | AT2G20340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT4G28680 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00024G00850 ATR_00039G01370 ATR_00092G00230 ... | 4 | |
| Tree-based ortholog | 1-to-1 | ATR_00039G01370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00039G01370 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL3G41150 AL7G13110 | 2 | |
| Tree-based ortholog | 1-to-1 | AL7G13110 | 1 | ||
| Anchor point | 1-to-many | AL3G41150 AL7G13110 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G13110 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV0G27220 BV2G10180 BV7G00250 ... | 5 | |
| Tree-based ortholog | 1-to-1 | BV7G00250 | 1 | ||
| Anchor point | 1-to-1 | BV7G00250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G00250 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR01G08470 BR07G00390 BR07G00400 ... | 6 | |
| Tree-based ortholog | 1-to-1 | BR01G08470 | 1 | ||
| Anchor point | 1-to-many | BR09G45310 BR07G00390 BR01G08470 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G08470 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_003G33360 CRU_003G33370 CRU_003G33380 ... | 4 | |
| Tree-based ortholog | 1-to-1 | CRU_007G11300 | 1 | ||
| Anchor point | 1-to-many | CRU_007G11300 CRU_003G33360 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G11300 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00034G00630 CP00051G00680 CP00087G00370 ... | 4 | |
| Tree-based ortholog | 1-to-1 | CP00087G00370 | 1 | ||
| Anchor point | 1-to-1 | CP00087G00370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00087G00370 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR01G06240 | 1 | |
| Tree-based ortholog | 1-to-1 | CR01G06240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR01G06240 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL03G06210 CL07G01580 | 2 | |
| Tree-based ortholog | 1-to-1 | CL07G01580 | 1 | ||
| Anchor point | 1-to-1 | CL07G01580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G01580 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00002G02360 CS00010G00750 CS00054G00200 ... | 8 | |
| Tree-based ortholog | 1-to-1 | CS00060G00110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00060G00110 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00018G00570 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00018G00570 | 1 | ||
| Anchor point | 1-to-1 | CM00018G00570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00018G00570 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G14540 EG0005G14570 EG0005G14580 ... | 8 | |
| Tree-based ortholog | 1-to-many | EG0011G11870 EG0011G11880 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0011G11870 EG0011G11880 | 2 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV2G10380 FV3G16050 FV3G16060 ... | 4 | |
| Tree-based ortholog | 1-to-1 | FV2G10380 | 1 | ||
| Anchor point | 1-to-1 | FV2G10380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G10380 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM03G32510 GM07G06500 GM09G02530 ... | 4 | |
| Tree-based ortholog | 1-to-1 | GM03G32510 | 1 | ||
| Anchor point | 1-to-many | GM03G32510 GM19G35233 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM03G32510 | 1 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR01G08070 GR01G18250 GR02G01690 ... | 7 | |
| Tree-based ortholog | 1-to-1 | GR01G18250 | 1 | ||
| Anchor point | 1-to-1 | GR01G18250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR01G18250 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ1G062670 LJ3G033840 | 2 | |
| Tree-based ortholog | 1-to-1 | LJ1G062670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G062670 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G069170 MD00G378960 MD11G014350 | 3 | |
| Tree-based ortholog | 1-to-1 | MD00G327360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G327360 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME12693G00030 | 1 | |
| Tree-based ortholog | 1-to-1 | ME06825G00540 | 1 | ||
| Anchor point | 1-to-1 | ME06825G00540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME12693G00030 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT2G029430 MT2G029450 MT7G058700 ... | 6 | |
| Tree-based ortholog | 1-to-many | MT7G098730 MT7G098700 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT7G098730 MT7G098700 | 2 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G56380 OS05G43510 OS07G25590 ... | 7 | |
| Tree-based ortholog | 1-to-1 | OS07G25590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G25590 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL02G01420 | 1 | |
| Tree-based ortholog | 1-to-1 | OL02G01420 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL02G01420 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00102G00180 PP00102G00200 PP00102G00240 ... | 4 | |
| Tree-based ortholog | 1-to-many | PP00102G00180 PP00102G00200 PP00102G00240 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00102G00260 PP00102G00240 PP00102G00180 ... | 4 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT02G25560 PT04G03620 PT13G05280 ... | 5 | |
| Tree-based ortholog | 1-to-1 | PT02G25560 | 1 | ||
| Anchor point | 1-to-1 | PT02G25560 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT02G25560 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_003G20770 PPE_004G08240 PPE_004G08250 ... | 7 | |
| Tree-based ortholog | 1-to-1 | PPE_008G22880 | 1 | ||
| Anchor point | 1-to-1 | PPE_008G22880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G22880 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC29637G00030 RC29950G00630 | 2 | |
| Tree-based ortholog | 1-to-1 | RC29637G00030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29637G00030 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G044120 SL03G045020 SL07G054280 ... | 5 | |
| Tree-based ortholog | 1-to-1 | SL09G064430 | 1 | ||
| Anchor point | 1-to-1 | SL09G064430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G064430 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST03G010370 ST07G019860 ST07G019870 ... | 7 | |
| Tree-based ortholog | 1-to-1 | ST09G015580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G015580 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP3G33580 TP7G26650 | 2 | |
| Tree-based ortholog | 1-to-1 | TP7G26650 | 1 | ||
| Anchor point | 1-to-many | TP7G26650 TP3G33580 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G26650 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0001G24700 TC0002G00890 TC0002G00910 ... | 6 | |
| Tree-based ortholog | 1-to-1 | TC0001G24700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G24700 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV04G04340 VV04G04350 VV07G11790 ... | 5 | |
| Tree-based ortholog | 1-to-1 | VV07G11790 | 1 | ||
| Anchor point | 1-to-1 | VV07G11790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV07G11790 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G05910 ZM01G05930 ZM01G44860 ... | 8 | |
| Tree-based ortholog | 1-to-many | ZM10G10990 ZM04G07940 ZM10G10980 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G44860 | 1 |