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Integrative Orthology Viewer:
AT4G25740
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT4G25740 AT5G41520 | 2 |  |
| Tree-based ortholog | AT4G25740 | 1 | ||
| Anchor point | AT5G52650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT4G25740 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00017G01690 | 1 | |
| Tree-based ortholog | 1-to-many | ATR_00001G03140 ATR_00017G01690 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00017G01690 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL7G36150 | 1 | |
| Tree-based ortholog | 1-to-1 | AL7G16380 | 1 | ||
| Anchor point | 1-to-many | AL7G16380 AL8G17060 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G17060 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV3G03380 | 1 | |
| Tree-based ortholog | 1-to-many | BV5G06990 BV3G03380 | 2 | ||
| Anchor point | 1-to-1 | BV3G03380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G06990 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR04G10660 BR08G17520 | 2 | |
| Tree-based ortholog | 1-to-many | BR08G17520 BR01G15590 BR03G48750 ... | 5 | ||
| Anchor point | 1-to-many | BR03G48750 BR08G17520 BR01G15590 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR08G17520 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_007G32620 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_007G14380 | 1 | ||
| Anchor point | 1-to-many | CRU_007G14380 CRU_008G12530 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G12530 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR09G10520 | 1 | |
| Tree-based ortholog | 1-to-1 | CR09G10520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR09G10520 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL01G02220 | 1 | |
| Tree-based ortholog | 1-to-many | CL07G09350 CL01G02220 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G02220 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00097G00250 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00097G00250 | 1 | ||
| Anchor point | 1-to-1 | CS00097G00250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00097G00250 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00005G06800 | 1 | |
| Tree-based ortholog | 1-to-many | CM00027G02890 CM00005G06800 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00005G06800 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0004G14660 EG0005G05710 | 2 | |
| Tree-based ortholog | 1-to-many | EG0004G14660 EG0005G05710 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0005G05710 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV5G03470 | 1 | |
| Tree-based ortholog | 1-to-1 | FV5G03470 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G03470 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM05G37470 GM08G02070 | 2 | |
| Tree-based ortholog | 1-to-many | GM05G37470 GM08G02070 GM11G02410 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM08G02070 GM05G37470 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR06G05130 | 1 | |
| Tree-based ortholog | 1-to-1 | GR06G05130 | 1 | ||
| Anchor point | 1-to-many | GR06G05130 GR03G15550 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G05130 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ4G046250 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ4G046250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G046250 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G034730 MD00G284810 MD12G007720 ... | 4 | |
| Tree-based ortholog | 1-to-many | MD12G007720 MD14G009510 MD00G284810 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD14G009510 MD00G284810 MD12G007720 | 3 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME00341G00570 ME00636G00010 ME06089G00720 | 3 | |
| Tree-based ortholog | 1-to-many | ME00636G00010 ME06089G00720 ME00341G00570 | 3 | ||
| Anchor point | 1-to-many | ME06089G00720 ME00341G00570 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME06089G00720 ME00636G00010 ME00341G00570 | 3 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT8G098850 | 1 | |
| Tree-based ortholog | 1-to-many | MT8G098850 MT5G010025 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G098850 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G73160 OS04G35090 | 2 | |
| Tree-based ortholog | 1-to-many | OS01G73160 OS04G35090 OS02G34460 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G73160 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL01G01040 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL01G01040 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00018G01190 PP00043G00250 PP00067G01200 ... | 7 | |
| Tree-based ortholog | 1-to-many | PP00067G01200 PP00255G00110 PP00095G00310 ... | 7 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00255G00110 PP00095G00310 PP00281G00040 ... | 7 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT05G04010 PT17G14670 | 2 | |
| Tree-based ortholog | 1-to-many | PT17G14670 PT13G02790 PT05G04010 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT05G04010 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_001G58060 PPE_001G58070 PPE_002G02250 | 3 | |
| Tree-based ortholog | 1-to-1 | PPE_002G15580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PPE_001G58060 PPE_001G58070 PPE_002G02250 | 3 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30190G04350 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30169G03640 | 1 | ||
| Anchor point | 1-to-1 | RC30169G03640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30190G04350 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL01G099670 | 1 | |
| Tree-based ortholog | 1-to-many | SL01G099670 SL12G096540 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G099670 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST01G037440 | 1 | |
| Tree-based ortholog | 1-to-many | ST01G037440 ST12G028880 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G037440 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP6G14820 | 1 | |
| Tree-based ortholog | 1-to-many | TP7G23770 TP6G14820 | 2 | ||
| Anchor point | 1-to-many | TP7G23770 TP6G14820 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G14820 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0003G18550 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0003G18550 | 1 | ||
| Anchor point | 1-to-1 | TC0003G18550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G18550 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV02G03600 VV16G07880 | 2 | |
| Tree-based ortholog | 1-to-many | VV16G07880 VV02G03600 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV16G07880 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM02G15140 ZM10G16680 | 2 | |
| Tree-based ortholog | 1-to-many | ZM08G27450 ZM03G20380 ZM02G15140 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM10G16680 ZM02G15140 | 2 |