Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT4G25500
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT4G25500 | 1 |  |
| Tree-based ortholog | AT4G25500 | 1 | ||
| Anchor point | AT5G52040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT4G25500 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00069G00930 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00069G00930 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL7G16640 | 1 | |
| Tree-based ortholog | 1-to-1 | AL7G16640 | 1 | ||
| Anchor point | 1-to-many | AL8G16330 AL7G16640 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G16640 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV0G31370 | 1 | |
| Tree-based ortholog | 1-to-1 | BV0G31370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G66520 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR01G15390 BR08G17620 | 2 | |
| Tree-based ortholog | 1-to-many | BR01G15390 BR08G17620 | 2 | ||
| Anchor point | 1-to-many | BR03G14300 BR01G15390 BR08G17620 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR08G17620 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-many | CRU_007G14630 CRU_008G11910 | 2 | |
| Tree-based ortholog | 1-to-1 | CRU_007G14630 | 1 | ||
| Anchor point | 1-to-many | CRU_007G14630 CRU_008G11910 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G14630 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00037G01360 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00037G01360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00037G01360 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR12G07740 CR16G10550 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR12G07740 CR16G10550 | 2 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-many | CL10G04510 CL10G04520 | 2 | |
| Tree-based ortholog | 1-to-many | CL10G04510 CL10G04520 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G04520 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00062G00510 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00062G00510 | 1 | ||
| Anchor point | 1-to-1 | CS00062G00510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00062G00510 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-many | CM00021G04790 CM00021G04800 | 2 | |
| Tree-based ortholog | 1-to-many | CM00021G04790 CM00021G04800 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CM00021G04800 CM00021G04790 | 2 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0011G02010 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0011G02010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G02010 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV7G39100 | 1 | |
| Tree-based ortholog | 1-to-1 | FV7G39100 | 1 | ||
| Anchor point | 1-to-1 | FV7G39100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G09530 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM10G38400 GM20G29460 | 2 | |
| Tree-based ortholog | 1-to-many | GM20G29460 GM10G38400 | 2 | ||
| Anchor point | 1-to-many | GM20G29460 GM10G38400 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM20G29460 GM10G38400 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR08G28030 | 1 | |
| Tree-based ortholog | 1-to-1 | GR08G28030 | 1 | ||
| Anchor point | 1-to-1 | GR08G28030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR08G28030 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ5G033810 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ5G033810 | 1 | ||
| Anchor point | 1-to-1 | LJ5G033810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G033810 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-1 | MD07G017990 | 1 | |
| Tree-based ortholog | 1-to-1 | MD00G349960 | 1 | ||
| Anchor point | 1-to-1 | MD07G017990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD07G017990 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME11425G00460 | 1 | |
| Tree-based ortholog | 1-to-1 | ME11425G00460 | 1 | ||
| Anchor point | 1-to-1 | ME11425G00460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME11425G00460 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT1G101520 | 1 | |
| Tree-based ortholog | 1-to-1 | MT1G101520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G101520 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS02G03040 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G03040 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL05G04120 | 1 | |
| Physcomitrella patens | Tree-based ortholog | 1-to-1 | PP00144G00450 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00144G00450 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT12G13360 PT15G13580 | 2 | |
| Tree-based ortholog | 1-to-many | PT15G13580 PT12G13360 | 2 | ||
| Anchor point | 1-to-many | PT15G13580 PT02G15360 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT15G13580 PT12G13360 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_002G27730 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_002G27730 | 1 | ||
| Anchor point | 1-to-1 | PPE_002G27730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G27730 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30147G00650 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30147G00650 | 1 | ||
| Anchor point | 1-to-1 | RC30147G00650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30147G00650 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL11G072340 | 1 | |
| Tree-based ortholog | 1-to-many | SL11G072340 SL03G026240 | 2 | ||
| Anchor point | 1-to-1 | SL03G026240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL11G072340 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST11G029070 | 1 | |
| Tree-based ortholog | 1-to-many | ST11G029070 ST03G015070 | 2 | ||
| Anchor point | 1-to-1 | ST03G015070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST11G029070 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP7G23520 | 1 | |
| Tree-based ortholog | 1-to-1 | TP7G23520 | 1 | ||
| Anchor point | 1-to-many | TP6G14290 TP7G23520 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G23520 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0003G17160 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0003G17160 | 1 | ||
| Anchor point | 1-to-1 | TC0003G17160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G17160 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV16G00670 | 1 | |
| Tree-based ortholog | 1-to-1 | VV16G00670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV15G08080 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM05G17970 ZM04G40350 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM04G40350 ZM05G17970 | 2 |