Integrative Orthology Viewer: AT4G23570 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT4G11260 AT4G23570 | 2 | |
Tree-based ortholog | AT4G23570 | 1 | ||
Anchor point | AT4G11260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT4G23570 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00053G00410 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00053G00410 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00053G00410 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL7G18610 | 1 | |
Tree-based ortholog | 1-to-1 | AL7G18610 | 1 | ||
Anchor point | 1-to-1 | AL7G18610 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G18610 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV3G03150 | 1 | |
Tree-based ortholog | 1-to-1 | BV3G03150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G03150 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G13550 BR03G25890 BR03G47230 ... | 4 | |
Tree-based ortholog | 1-to-many | BR01G13550 BR03G47230 BR06G20320 | 3 | ||
Anchor point | 1-to-many | BR03G25890 BR03G47230 BR01G13550 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G47230 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_006G28980 CRU_007G16690 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_007G16690 | 1 | ||
Anchor point | 1-to-many | CRU_007G16690 CRU_006G28980 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G16690 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00107G01320 | 1 | |
Tree-based ortholog | 1-to-many | CP01838G00020 CP00107G01320 CP00003G00010 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00107G01320 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR12G06640 | 1 | |
Tree-based ortholog | 1-to-1 | CR12G06640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G06640 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL05G09700 | 1 | |
Tree-based ortholog | 1-to-1 | CL05G09700 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G09700 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00097G00390 | 1 | |
Tree-based ortholog | 1-to-1 | CS00097G00390 | 1 | ||
Anchor point | 1-to-1 | CS00097G00390 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00097G00390 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00006G10740 | 1 | |
Tree-based ortholog | 1-to-1 | CM00006G10740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00006G10740 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0001G22960 | 1 | |
Tree-based ortholog | 1-to-many | EG0004G14540 EG0001G21060 EG0001G21050 ... | 4 | ||
Anchor point | 1-to-1 | EG0004G14540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G22960 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV7G37530 | 1 | |
Tree-based ortholog | 1-to-1 | FV7G37530 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G37530 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM09G23980 GM10G37441 GM16G29450 | 3 | |
Tree-based ortholog | 1-to-many | GM01G43150 GM11G02341 GM09G23980 ... | 5 | ||
Anchor point | 1-to-many | GM01G43150 GM11G02341 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM16G29450 GM09G23980 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR03G06950 GR04G11690 GR08G27340 | 3 | |
Tree-based ortholog | 1-to-many | GR04G11690 GR03G06950 GR08G27340 | 3 | ||
Anchor point | 1-to-1 | GR08G27340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR04G11690 | 1 | ||
Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G010070 | 1 | |
Malus domestica | Orthologous gene family | many-to-many | MD00G513990 MD01G020900 | 2 | |
Tree-based ortholog | 1-to-many | MD00G256780 MD00G178020 MD00G178060 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G513990 MD01G020900 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME06089G00620 | 1 | |
Tree-based ortholog | 1-to-many | ME05280G00760 ME06089G00620 ME05280G00750 | 3 | ||
Anchor point | 1-to-many | ME05280G00750 ME06089G00620 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06089G00620 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT5G009930 MT6G053290 | 2 | |
Tree-based ortholog | 1-to-many | MT5G009930 MT6G060735 MT6G060740 ... | 4 | ||
Anchor point | 1-to-1 | MT5G009930 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT6G053290 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS01G43540 | 1 | |
Tree-based ortholog | 1-to-1 | OS01G43540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G43540 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL07G00740 | 1 | |
Tree-based ortholog | 1-to-1 | OL07G00740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL07G00740 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00244G00260 | 1 | |
Tree-based ortholog | 1-to-1 | PP00244G00260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00244G00260 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT04G07020 PT04G07110 PT17G14980 | 3 | |
Tree-based ortholog | 1-to-many | PT04G07020 PT04G07110 PT17G14980 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT17G14980 PT04G07110 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_002G28960 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_002G28960 | 1 | ||
Anchor point | 1-to-1 | PPE_002G28960 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G28960 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30169G03480 | 1 | |
Tree-based ortholog | 1-to-many | RC30190G04480 RC30169G03480 | 2 | ||
Anchor point | 1-to-many | RC30190G04480 RC30169G03480 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30169G03480 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G007670 SL06G036420 | 2 | |
Tree-based ortholog | 1-to-many | SL06G036420 SL03G007670 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G007670 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST03G012020 ST06G016340 | 2 | |
Tree-based ortholog | 1-to-many | ST06G016340 ST03G012020 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G012020 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP6G06190 TP7G21490 | 2 | |
Tree-based ortholog | 1-to-1 | TP7G21490 | 1 | ||
Anchor point | 1-to-many | TP7G21490 TP6G06190 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G06190 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0003G18720 | 1 | |
Tree-based ortholog | 1-to-1 | TC0003G18720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G18720 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV16G07610 | 1 | |
Tree-based ortholog | 1-to-1 | VV16G07610 | 1 | ||
Anchor point | 1-to-1 | VV02G03730 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV16G07610 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM03G37200 ZM08G24120 | 2 | |
Tree-based ortholog | 1-to-many | ZM08G24120 ZM03G37200 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM03G37200 ZM08G24120 | 2 |