Integrative Orthology Viewer: AT4G23410 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT3G12090 AT4G23410 | 2 | |
Tree-based ortholog | AT4G23410 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT4G23410 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00108G00060 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00108G00060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00108G00060 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL3G12550 | 1 | |
Tree-based ortholog | 1-to-1 | AL7G18770 | 1 | ||
Anchor point | N/A | AL7G18770 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G18770 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV0G33270 | 1 | |
Tree-based ortholog | 1-to-1 | BV0G33270 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G33270 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR03G47120 BR05G30570 | 2 | |
Tree-based ortholog | 1-to-many | BR01G13340 BR03G47120 | 2 | ||
Anchor point | N/A | BR01G13340 BR09G12930 BR03G47120 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G47120 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_003G10930 CRU_007G16880 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_007G16880 | 1 | ||
Anchor point | N/A | CRU_007G16880 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G16880 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP28125G00030 | 1 | |
Tree-based ortholog | 1-to-1 | CP28125G00030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP28125G00030 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL05G22010 | 1 | |
Tree-based ortholog | 1-to-many | CL09G20960 CL05G22010 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G22010 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00270G00090 | 1 | |
Tree-based ortholog | 1-to-1 | CS00270G00090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00270G00090 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00016G07850 | 1 | |
Tree-based ortholog | 1-to-many | CM01595G00270 CM00016G07850 | 2 | ||
Anchor point | N/A | CM00005G06250 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00016G07850 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0010G09770 | 1 | |
Tree-based ortholog | 1-to-1 | EG0007G22240 | 1 | ||
Anchor point | N/A | EG0005G05080 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G09770 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV7G24190 | 1 | |
Tree-based ortholog | 1-to-1 | FV7G24190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G24190 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM10G35650 GM20G31900 | 2 | |
Tree-based ortholog | 1-to-many | GM10G35650 GM20G31900 GM02G07090 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM10G35650 GM20G31900 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR12G00400 | 1 | |
Tree-based ortholog | 1-to-1 | GR12G00400 | 1 | ||
Anchor point | N/A | GR04G20960 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR12G00400 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-many | LJ3G032060 LJ4G047550 LJ1G072220 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G012430 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G016100 MD00G486050 MD00G486080 ... | 5 | |
Tree-based ortholog | 1-to-many | MD00G486050 MD01G009080 MD00G016100 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G016100 MD10G003680 MD00G486080 | 3 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME02963G00050 ME12004G00550 | 2 | |
Tree-based ortholog | 1-to-many | ME02963G00050 ME12004G00550 | 2 | ||
Anchor point | N/A | ME07035G00100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME12004G00550 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G095530 MT6G033335 | 2 | |
Tree-based ortholog | 1-to-many | MT1G095530 MT6G033335 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT6G033335 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G74570 OS05G03530 | 2 | |
Tree-based ortholog | 1-to-many | OS01G74570 OS05G03530 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS08G34460 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00303G00250 PP00191G00450 PP00002G00130 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00002G00130 PP00303G00250 PP00022G02220 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT08G04160 PT10G22030 | 2 | |
Tree-based ortholog | 1-to-many | PT08G04160 PT10G22030 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G22030 PT08G04160 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_002G20810 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_002G20810 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G20810 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC28540G00010 | 1 | |
Tree-based ortholog | 1-to-1 | RC28540G00010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28540G00010 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL04G049080 | 1 | |
Tree-based ortholog | 1-to-1 | SL04G049080 | 1 | ||
Anchor point | N/A | SL08G080730 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G049080 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST04G016850 | 1 | |
Tree-based ortholog | 1-to-1 | ST04G016850 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G016850 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP3G10320 TP7G21320 | 2 | |
Tree-based ortholog | 1-to-1 | TP7G21320 | 1 | ||
Anchor point | N/A | TP7G21320 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G21320 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0010G06730 | 1 | |
Tree-based ortholog | 1-to-1 | TC0010G06730 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0010G06730 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV13G03370 | 1 | |
Tree-based ortholog | 1-to-1 | VV13G03370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G03370 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM06G03740 ZM08G20840 | 2 | |
Tree-based ortholog | 1-to-many | ZM08G27070 ZM06G30680 ZM08G20840 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM06G03740 ZM08G20840 | 2 |