Integrative Orthology Viewer: AT4G17615 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT4G17615 AT5G47100 | 2 | |
Tree-based ortholog | AT4G17615 | 1 | ||
Anchor point | AT5G47100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT4G17615 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00002G01470 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00002G01470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00002G01470 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL7G25330 AL8G00880 | 2 | |
Tree-based ortholog | 1-to-1 | AL7G25330 | 1 | ||
Anchor point | 1-to-many | AL8G00880 AL7G25330 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G25330 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV5G22770 | 1 | |
Tree-based ortholog | 1-to-1 | BV5G22770 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G22770 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G08880 BR02G29280 BR03G43980 ... | 4 | |
Tree-based ortholog | 1-to-1 | BR01G08880 | 1 | ||
Anchor point | 1-to-many | BR09G22440 BR01G08880 BR02G29280 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G08880 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_007G22720 CRU_008G00680 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_007G22720 | 1 | ||
Anchor point | 1-to-many | CRU_007G22720 CRU_008G00680 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G22720 | 1 | ||
Carica papaya | Tree-based ortholog | 1-to-many | CP00003G00870 CP00096G00210 CP00571G00020 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00003G00870 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR08G01910 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR15G01610 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL10G00080 | 1 | |
Tree-based ortholog | 1-to-1 | CL10G00080 | 1 | ||
Anchor point | 1-to-many | CL10G00080 CL09G12430 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G00080 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00095G00140 | 1 | |
Tree-based ortholog | 1-to-1 | CS00095G00140 | 1 | ||
Anchor point | 1-to-1 | CS00095G00140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00095G00140 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00021G02040 | 1 | |
Tree-based ortholog | 1-to-1 | CM00021G02040 | 1 | ||
Anchor point | 1-to-many | CM01596G00440 CM00021G02040 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00021G02040 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0005G03060 | 1 | |
Tree-based ortholog | 1-to-many | EG0004G17500 EG0005G03060 | 2 | ||
Anchor point | 1-to-many | EG0004G17500 EG0005G03060 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0005G03060 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV5G31490 | 1 | |
Tree-based ortholog | 1-to-1 | FV5G31490 | 1 | ||
Anchor point | 1-to-1 | FV5G31490 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G31490 | 1 | ||
Glycine max | Orthologous gene family | many-to-1 | GM05G05580 | 1 | |
Tree-based ortholog | 1-to-many | GM11G04160 GM05G05580 GM17G15893 | 3 | ||
Anchor point | 1-to-many | GM17G15893 GM11G04160 GM05G05580 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM17G15893 GM05G05580 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR03G17870 GR07G03030 | 2 | |
Tree-based ortholog | 1-to-many | GR07G03030 GR04G19140 GR03G17870 | 3 | ||
Anchor point | 1-to-many | GR06G21470 GR03G17870 GR07G03030 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G03030 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ4G020290 | 1 | |
Tree-based ortholog | 1-to-many | LJ2G033850 LJ4G020290 | 2 | ||
Anchor point | 1-to-1 | LJ2G033850 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G020290 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G363620 MD06G004720 | 2 | |
Tree-based ortholog | 1-to-many | MD00G363620 MD06G004720 MD00G005410 | 3 | ||
Anchor point | 1-to-1 | MD06G004720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G363620 MD06G004720 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME07290G00050 | 1 | |
Tree-based ortholog | 1-to-many | ME00738G00010 ME07290G00050 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07290G00050 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT4G099210 | 1 | |
Tree-based ortholog | 1-to-many | MT5G013560 MT4G099210 | 2 | ||
Anchor point | 1-to-many | MT5G013560 MT4G099210 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G099210 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS10G41510 | 1 | |
Tree-based ortholog | 1-to-1 | OS10G41510 | 1 | ||
Anchor point | 1-to-1 | OS10G41510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS10G41510 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL15G00720 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL15G00720 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00064G00820 PP00219G00310 PP00065G00310 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00028G00370 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-1 | PT01G15020 | 1 | |
Tree-based ortholog | 1-to-1 | PT01G15020 | 1 | ||
Anchor point | 1-to-1 | PT01G15020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT01G15020 | 1 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_005G05770 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_005G05770 | 1 | ||
Anchor point | 1-to-1 | PPE_005G05770 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G05770 | 1 | ||
Ricinus communis | Tree-based ortholog | 1-to-1 | RC29822G01790 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30024G00330 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL08G077770 | 1 | |
Tree-based ortholog | 1-to-many | SL08G077770 SL06G060980 SL08G007160 | 3 | ||
Anchor point | 1-to-many | SL08G077770 SL06G060980 SL08G007160 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL08G077770 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST08G023240 | 1 | |
Tree-based ortholog | 1-to-many | ST08G023240 ST06G021020 ST08G006040 | 3 | ||
Anchor point | 1-to-many | ST08G006040 ST08G023240 ST06G021020 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST08G023240 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP2G11910 TP7G16540 | 2 | |
Tree-based ortholog | 1-to-1 | TP7G16540 | 1 | ||
Anchor point | 1-to-many | TP7G16540 TP2G11910 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G16540 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0003G23670 | 1 | |
Tree-based ortholog | 1-to-1 | TC0003G23670 | 1 | ||
Anchor point | 1-to-1 | TC0003G23670 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G23670 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV02G00740 VV02G00760 | 2 | |
Tree-based ortholog | 1-to-many | VV02G00760 VV02G00740 | 2 | ||
Anchor point | 1-to-1 | VV02G00740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV02G00740 VV02G00760 | 2 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G21660 ZM09G17850 | 2 | |
Tree-based ortholog | 1-to-many | ZM09G17850 ZM01G21660 | 2 | ||
Anchor point | 1-to-1 | ZM09G17850 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM09G17850 ZM01G21660 | 2 |