Integrative Orthology Viewer: AT4G14880 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT3G22460 AT4G14880 | 2 | |
Tree-based ortholog | AT4G14880 | 1 | ||
Anchor point | AT3G22460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT4G14880 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00004G00370 | 1 | |
Tree-based ortholog | 1-to-many | ATR_00004G00380 ATR_00004G00370 ATR_00004G00390 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00004G00370 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL3G24830 AL7G29110 | 2 | |
Tree-based ortholog | 1-to-1 | AL7G29110 | 1 | ||
Anchor point | 1-to-many | AL7G29110 AL3G24830 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G29110 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV4G05090 | 1 | |
Tree-based ortholog | 1-to-1 | BV4G05090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G05090 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G20960 BR08G07220 | 2 | |
Tree-based ortholog | 1-to-many | BR01G20960 BR08G07220 | 2 | ||
Anchor point | 1-to-many | BR08G07220 BR01G20960 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR08G07220 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_007G26060 | 1 | |
Tree-based ortholog | 1-to-1 | CRU_007G26060 | 1 | ||
Anchor point | 1-to-1 | CRU_007G26060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G26060 | 1 | ||
Carica papaya | Tree-based ortholog | 1-to-many | CP00117G00630 CP00058G00940 | 2 | |
Anchor point | 1-to-1 | CP00058G00940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00009G03680 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR16G04890 CR08G02820 CR16G08150 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR16G08150 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL02G16640 | 1 | |
Tree-based ortholog | 1-to-1 | CL02G16640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G07670 | 1 | ||
Citrus sinensis | Tree-based ortholog | 1-to-many | CS00011G00720 CS00144G00070 | 2 | |
Anchor point | 1-to-1 | CS00011G00720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00144G00070 | 1 | ||
Cucumis melo | Tree-based ortholog | 1-to-1 | CM00003G04790 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00003G04790 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G13900 EG2187G00010 | 2 | |
Tree-based ortholog | 1-to-many | EG0008G28070 EG0008G35540 EG2187G00010 ... | 6 | ||
Anchor point | 1-to-1 | EG0008G28070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G13910 | 1 | ||
Fragaria vesca | Tree-based ortholog | 1-to-many | FV5G07620 FV0G24660 | 2 | |
Anchor point | 1-to-1 | FV5G07620 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G07620 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM03G40490 GM11G00810 GM19G43150 | 3 | |
Tree-based ortholog | 1-to-many | GM10G39320 GM20G28631 GM11G00810 ... | 5 | ||
Anchor point | 1-to-many | GM20G28631 GM11G00810 GM10G39320 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM11G00810 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR04G24550 GR06G23950 GR13G12200 | 3 | |
Tree-based ortholog | 1-to-many | GR06G23950 GR04G24550 GR13G12200 | 3 | ||
Anchor point | 1-to-1 | GR06G23950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G23950 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-many | LJ1G001210 LJ1G072980 | 2 | |
Anchor point | 1-to-1 | LJ1G001190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G072980 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD04G017830 MD13G018520 | 2 | |
Tree-based ortholog | 1-to-many | MD00G257920 MD13G018520 MD12G023590 ... | 4 | ||
Anchor point | 1-to-many | MD16G014340 MD13G018520 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD12G023590 | 1 | ||
Manihot esculenta | Tree-based ortholog | 1-to-many | ME01551G02080 ME03614G03770 ME03802G01030 | 3 | |
Anchor point | 1-to-1 | ME01551G02080 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME01551G02080 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT1G081610 | 1 | |
Tree-based ortholog | 1-to-many | MT1G103690 MT5G006340 MT1G081610 | 3 | ||
Anchor point | 1-to-many | MT1G103690 MT5G006340 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G006340 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G53650 OS12G42980 | 2 | |
Tree-based ortholog | 1-to-many | OS12G42980 OS03G53650 | 2 | ||
Anchor point | 1-to-1 | OS03G53650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS12G42980 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | 1-to-many | OL06G04490 OL02G01410 OL05G03160 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL12G03110 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00186G00210 PP00359G00260 PP00105G00480 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00071G00550 PP00017G00300 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT05G04840 PT05G04850 PT05G04870 | 3 | |
Tree-based ortholog | 1-to-many | PT08G15330 PT05G04840 PT05G04850 ... | 5 | ||
Anchor point | 1-to-1 | PT08G15330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT05G04840 PT05G04870 PT05G04850 ... | 4 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G01400 PPE_006G34250 | 2 | |
Tree-based ortholog | 1-to-many | PPE_001G01400 PPE_006G34250 | 2 | ||
Anchor point | 1-to-1 | PPE_001G01400 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G34250 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29844G01300 RC30128G00410 | 2 | |
Tree-based ortholog | 1-to-many | RC29844G01300 RC30128G00410 | 2 | ||
Anchor point | 1-to-1 | RC29844G01300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29844G01300 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL09G082060 | 1 | |
Tree-based ortholog | 1-to-1 | SL09G082060 | 1 | ||
Anchor point | 1-to-1 | SL09G082060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G082060 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST09G024030 | 1 | |
Tree-based ortholog | 1-to-1 | ST09G024030 | 1 | ||
Anchor point | 1-to-1 | ST09G024030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G024030 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP3G20230 TP7G13020 | 2 | |
Tree-based ortholog | 1-to-1 | TP7G13020 | 1 | ||
Anchor point | 1-to-many | TP7G13020 TP3G20230 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G13020 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0005G28850 | 1 | |
Tree-based ortholog | 1-to-many | TC0004G23510 TC0005G28850 | 2 | ||
Anchor point | 1-to-1 | TC0004G23510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G23510 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV14G03640 | 1 | |
Tree-based ortholog | 1-to-1 | VV14G03640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G03640 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-many | ZM01G30000 ZM02G15550 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G30000 | 1 |