Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT4G11420
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT4G11420 | 1 |  |
| Tree-based ortholog | AT4G11420 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT4G11420 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00111G00200 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00111G00200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00111G00200 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL6G34170 | 1 | |
| Tree-based ortholog | 1-to-1 | AL6G34170 | 1 | ||
| Anchor point | N/A | AL6G34170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G34170 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV4G09920 | 1 | |
| Tree-based ortholog | 1-to-1 | BV4G09920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G09920 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR02G27090 BR03G25910 BR08G09890 | 3 | |
| Tree-based ortholog | 1-to-1 | BR03G25910 | 1 | ||
| Anchor point | N/A | BR02G27090 BR03G47060 BR03G25910 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR02G27090 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_006G29200 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_006G29200 | 1 | ||
| Anchor point | N/A | CRU_006G29200 CRU_007G16940 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G29200 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00048G01240 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00048G01240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00048G01240 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR13G00570 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR13G00570 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-many | CL03G05890 CL03G05900 CL03G17240 | 3 | |
| Tree-based ortholog | 1-to-many | CL03G05900 CL03G05890 CL03G17240 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CL03G17240 CL03G05890 | 2 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00004G05240 | 1 | |
| Tree-based ortholog | 1-to-many | CS00004G05240 CS00400G00040 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00004G05240 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-many | CM00001G09480 CM00001G09530 | 2 | |
| Tree-based ortholog | 1-to-many | CM00001G09500 CM40050G00010 CM00001G09530 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00001G09530 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0008G26390 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0008G26390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G26390 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV6G02200 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G02200 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM03G32950 GM19G35661 | 2 | |
| Tree-based ortholog | 1-to-many | GM03G32950 GM19G35661 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM19G35661 GM03G32950 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR04G23810 GR07G30060 | 2 | |
| Tree-based ortholog | 1-to-many | GR04G23810 GR07G30060 GR07G30330 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR07G30060 GR04G23810 | 2 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ1G063060 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ1G063060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G063060 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-1 | MD12G021390 | 1 | |
| Tree-based ortholog | 1-to-many | MD04G016100 MD12G021390 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD12G021390 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME10305G00120 | 1 | |
| Tree-based ortholog | 1-to-many | ME10305G00120 ME02264G01440 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME02264G01440 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT7G099920 | 1 | |
| Tree-based ortholog | 1-to-many | MT7G087180 MT7G053110 MT7G099920 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G099920 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL07G04270 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL07G04270 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-many | PP00006G00880 PP00074G00670 PP00110G00330 | 3 | |
| Tree-based ortholog | 1-to-many | PP00110G00330 PP00006G00880 PP00074G00670 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00006G00880 PP00074G00670 PP00110G00330 | 3 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT05G02140 PT13G01190 | 2 | |
| Tree-based ortholog | 1-to-many | PT05G02140 PT13G01190 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT13G01190 PT05G02140 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_006G32220 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_006G32220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G32220 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC30128G02630 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30128G02630 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-many | SL09G010460 SL10G084670 | 2 | |
| Tree-based ortholog | 1-to-many | SL10G084670 SL09G010460 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G084670 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-many | ST09G009520 ST10G024270 | 2 | |
| Tree-based ortholog | 1-to-many | ST10G024270 ST09G009520 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G024270 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP6G06010 | 1 | |
| Tree-based ortholog | 1-to-1 | TP6G06010 | 1 | ||
| Anchor point | N/A | TP6G06010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G06010 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-many | TC0001G12630 TC0005G31630 | 2 | |
| Tree-based ortholog | 1-to-many | TC0005G31630 TC0001G12630 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G31630 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV14G09220 | 1 | |
| Tree-based ortholog | 1-to-1 | VV14G09220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G09220 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM03G02390 | 1 | |
| Tree-based ortholog | 1-to-many | ZM03G02390 ZM08G04700 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G02390 | 1 |