Integrative Orthology Viewer: AT4G10120 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G04920 AT4G10120 AT5G11110 ... | 4 | |
Tree-based ortholog | AT4G10120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT4G10120 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00033G01740 ATR_00099G00850 | 2 | |
Tree-based ortholog | 1-to-1 | ATR_00099G00850 | 1 | ||
Anchor point | N/A | ATR_00099G00850 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00099G00850 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G04360 AL6G10890 AL6G20580 ... | 4 | |
Tree-based ortholog | 1-to-1 | AL6G32420 | 1 | ||
Anchor point | N/A | AL6G32420 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G32420 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV2G10950 BV8G01860 | 2 | |
Tree-based ortholog | 1-to-1 | BV2G10950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G10950 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR02G10090 BR02G27590 BR03G04300 ... | 6 | |
Tree-based ortholog | 1-to-1 | BR02G27590 | 1 | ||
Anchor point | N/A | BR02G27590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR02G27590 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G03820 CRU_006G09370 CRU_006G27650 | 3 | |
Tree-based ortholog | 1-to-1 | CRU_006G27650 | 1 | ||
Anchor point | N/A | CRU_006G27650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G27650 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00046G00590 CP00083G00220 CP00142G00090 | 3 | |
Tree-based ortholog | 1-to-1 | CP00142G00090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00142G00090 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR12G08850 | 1 | |
Tree-based ortholog | 1-to-1 | CR12G08850 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G08850 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL06G08010 CL06G12180 CL11G02220 | 3 | |
Tree-based ortholog | 1-to-1 | CL11G02220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G02220 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00013G00520 CS00051G00890 CS00603G00040 ... | 4 | |
Tree-based ortholog | 1-to-1 | CS00603G00040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00603G00040 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00008G00370 CM00012G03260 CM00043G00180 | 3 | |
Tree-based ortholog | 1-to-1 | CM00008G00370 | 1 | ||
Anchor point | N/A | CM00008G00370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00008G00370 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0003G13620 EG0005G26580 EG0006G24480 ... | 4 | |
Tree-based ortholog | 1-to-1 | EG0006G24480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G24480 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV1G04720 FV2G16260 FV2G39700 ... | 5 | |
Tree-based ortholog | 1-to-1 | FV2G16260 | 1 | ||
Anchor point | N/A | FV2G16260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G16260 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM06G48200 GM08G42140 GM13G23060 ... | 6 | |
Tree-based ortholog | 1-to-1 | GM04G12220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM06G48200 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR04G29280 GR09G26210 GR10G11610 ... | 5 | |
Tree-based ortholog | 1-to-1 | GR09G26210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G26210 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ4G032280 | 1 | |
Tree-based ortholog | 1-to-1 | LJ4G032280 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G032280 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G162790 MD00G368160 MD00G368170 ... | 10 | |
Tree-based ortholog | 1-to-many | MD10G000360 MD00G162790 MD00G414870 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G162790 MD10G000360 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME00847G01780 ME03332G01160 ME07595G00060 ... | 5 | |
Tree-based ortholog | 1-to-many | ME09788G00040 ME07595G00060 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07595G00060 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT3G047380 MT4G115620 MT5G091340 | 3 | |
Tree-based ortholog | 1-to-1 | MT4G115620 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G047380 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G69030 OS02G09170 OS06G43630 ... | 4 | |
Tree-based ortholog | 1-to-1 | OS11G12810 | 1 | ||
Anchor point | N/A | OS11G12810 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS11G12810 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00131G00600 | 1 | |
Tree-based ortholog | 1-to-many | PP00131G00600 PP00066G01210 PP00131G00030 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00066G01210 PP00131G00600 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G31760 PT06G06430 PT13G09550 ... | 6 | |
Tree-based ortholog | 1-to-1 | PT13G09550 | 1 | ||
Anchor point | N/A | PT13G09550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT13G09550 | 1 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G15320 PPE_001G48780 PPE_007G26680 | 3 | |
Tree-based ortholog | 1-to-1 | PPE_008G00390 | 1 | ||
Anchor point | N/A | PPE_008G00390 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G00390 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC28543G00010 RC29848G01540 RC29904G00170 ... | 4 | |
Tree-based ortholog | 1-to-1 | RC30074G00030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30074G00030 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL07G007790 SL08G042000 SL11G045110 | 3 | |
Tree-based ortholog | 1-to-1 | SL11G045110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL11G045110 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST07G008720 ST08G013470 ST09G029260 ... | 4 | |
Tree-based ortholog | 1-to-1 | ST11G016590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST11G016590 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G03760 TP2G22240 TP6G07300 ... | 5 | |
Tree-based ortholog | 1-to-1 | TP6G07300 | 1 | ||
Anchor point | N/A | TP6G07300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G07300 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0004G20380 TC0008G16750 TC0009G02110 ... | 4 | |
Tree-based ortholog | 1-to-1 | TC0008G16750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0008G16750 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV04G12380 VV05G06550 VV11G01160 ... | 4 | |
Tree-based ortholog | 1-to-many | VV18G16130 VV18G17660 | 2 | ||
Anchor point | N/A | VV18G17660 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G17660 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM03G22980 ZM04G03320 ZM04G11990 ... | 4 | |
Tree-based ortholog | 1-to-1 | ZM04G03320 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM08G29100 ZM03G22980 | 2 |