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Integrative Orthology Viewer:
AT4G08390
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G77490 AT4G08390 | 2 |  |
| Tree-based ortholog | AT4G08390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT4G08390 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00017G02440 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00017G02440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00017G02440 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL2G26450 AL6G30700 | 2 | |
| Tree-based ortholog | 1-to-1 | AL6G30700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G30700 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV1G09500 | 1 | |
| Tree-based ortholog | 1-to-1 | BV1G09500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV1G09500 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR07G32480 BR09G16610 | 2 | |
| Tree-based ortholog | 1-to-1 | BR09G16610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G16610 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_002G23030 CRU_006G26000 | 2 | |
| Tree-based ortholog | 1-to-1 | CRU_006G26000 | 1 | ||
| Anchor point | N/A | CRU_006G26000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G26000 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00064G01000 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00064G01000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00006G02760 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR02G03340 | 1 | |
| Tree-based ortholog | 1-to-1 | CR02G03340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR02G03340 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL08G05780 | 1 | |
| Tree-based ortholog | 1-to-1 | CL08G05780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G05780 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00004G00600 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00004G00600 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00004G00600 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM01598G00520 | 1 | |
| Tree-based ortholog | 1-to-1 | CM01598G00520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM01598G00520 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0006G37170 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0006G37170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G37170 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV2G29780 | 1 | |
| Tree-based ortholog | 1-to-1 | FV2G29780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G29780 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM04G42720 GM06G12020 | 2 | |
| Tree-based ortholog | 1-to-many | GM04G42720 GM06G12020 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM06G12020 GM04G42720 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR09G24690 GR10G05140 | 2 | |
| Tree-based ortholog | 1-to-1 | GR09G24690 | 1 | ||
| Anchor point | N/A | GR10G05140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G24690 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-many | LJ3G044450 LJ3G048080 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G048080 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-1 | MD00G171270 | 1 | |
| Tree-based ortholog | 1-to-many | MD00G370290 MD15G005390 MD15G017920 ... | 6 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G171270 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME02904G00010 ME04314G00120 ME10384G00010 | 3 | |
| Tree-based ortholog | 1-to-many | ME10384G00010 ME03004G00010 ME04314G00120 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME04314G00120 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT3G088160 | 1 | |
| Tree-based ortholog | 1-to-1 | MT3G088160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G088160 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G34810 OS04G35520 OS12G07820 ... | 4 | |
| Tree-based ortholog | 1-to-many | OS12G07830 OS12G07820 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G35520 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL01G03870 | 1 | |
| Tree-based ortholog | 1-to-1 | OL01G03870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL01G03870 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-1 | PP00424G00160 | 1 | |
| Tree-based ortholog | 1-to-1 | PP00424G00160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00424G00160 | 1 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT02G08190 PT05G17920 | 2 | |
| Tree-based ortholog | 1-to-1 | PT05G17920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT02G08190 PT05G17920 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_001G49870 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_001G49870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G49870 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29648G01100 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29648G01100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29648G01100 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL06G060260 SL11G018550 | 2 | |
| Tree-based ortholog | 1-to-many | SL06G060260 SL11G018550 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G060260 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST06G019350 ST11G014780 | 2 | |
| Tree-based ortholog | 1-to-many | ST06G019350 ST11G014780 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST06G019350 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP5G32650 TP6G09510 | 2 | |
| Tree-based ortholog | 1-to-1 | TP6G09510 | 1 | ||
| Anchor point | N/A | TP6G09510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G09510 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0008G12390 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0008G12390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0008G12390 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV18G01950 | 1 | |
| Tree-based ortholog | 1-to-1 | VV18G01950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G01950 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM02G14900 ZM05G30510 | 2 | |
| Tree-based ortholog | 1-to-many | ZM02G30160 ZM10G16920 ZM01G34660 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G14900 | 1 |