Integrative Orthology Viewer: AT4G00490 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT2G45880 AT4G00490 AT5G45300 | 3 | |
Tree-based ortholog | AT4G00490 | 1 | ||
Anchor point | AT2G45880 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT4G00490 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00011G02160 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00009G02280 | 1 | ||
Anchor point | 1-to-1 | ATR_00009G02280 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00009G02280 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL4G33850 | 1 | |
Tree-based ortholog | 1-to-1 | AL6G41140 | 1 | ||
Anchor point | 1-to-many | AL6G41140 AL4G33850 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G41140 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV1G06730 BV5G09070 | 2 | |
Tree-based ortholog | 1-to-1 | BV1G06720 | 1 | ||
Anchor point | 1-to-1 | BV1G06720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV1G06720 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR02G27900 BR05G05340 | 2 | |
Tree-based ortholog | 1-to-1 | BR09G01780 | 1 | ||
Anchor point | 1-to-1 | BR09G01780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G01780 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_004G27540 | 1 | |
Tree-based ortholog | 1-to-1 | CRU_006G35520 | 1 | ||
Anchor point | 1-to-many | CRU_006G35520 CRU_004G27540 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G35520 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00018G02460 | 1 | |
Tree-based ortholog | 1-to-1 | CP00018G02470 | 1 | ||
Anchor point | 1-to-1 | CP00018G02460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00018G02470 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR01G09560 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G14940 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL06G03620 CL07G15730 | 2 | |
Tree-based ortholog | 1-to-1 | CL06G03620 | 1 | ||
Anchor point | 1-to-1 | CL06G03620 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G03620 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00001G03050 CS00494G00130 | 2 | |
Tree-based ortholog | 1-to-1 | CS00001G03060 | 1 | ||
Anchor point | 1-to-1 | CS00001G03050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00001G03060 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00027G01560 CM00047G00800 | 2 | |
Tree-based ortholog | 1-to-1 | CM00047G00800 | 1 | ||
Anchor point | 1-to-1 | CM00047G00800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00047G00800 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0004G21400 EG0005G01300 | 2 | |
Tree-based ortholog | 1-to-1 | EG0005G01290 | 1 | ||
Anchor point | 1-to-1 | EG0005G01290 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0005G01290 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV7G08150 | 1 | |
Tree-based ortholog | 1-to-1 | FV7G08130 | 1 | ||
Anchor point | 1-to-1 | FV7G08130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G08130 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G35500 GM09G35070 GM09G39603 ... | 4 | |
Tree-based ortholog | 1-to-many | GM07G14030 GM18G46630 GM09G39603 | 3 | ||
Anchor point | 1-to-many | GM09G39603 GM18G46630 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM09G39603 GM18G46630 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR04G15860 GR07G09910 GR08G21830 | 3 | |
Tree-based ortholog | 1-to-1 | GR07G09920 | 1 | ||
Anchor point | 1-to-many | GR04G15860 GR07G09910 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G09920 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G034510 LJ2G027480 | 2 | |
Tree-based ortholog | 1-to-1 | LJ1G034510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G034510 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G125220 MD00G227910 MD00G301190 ... | 7 | |
Tree-based ortholog | 1-to-many | MD00G486530 MD00G227910 MD15G029540 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G486530 MD15G029540 MD00G227910 | 3 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME03581G01840 | 1 | |
Tree-based ortholog | 1-to-1 | ME03581G01820 | 1 | ||
Anchor point | 1-to-1 | ME03581G01820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03581G01820 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT5G026210 MT7G077410 | 2 | |
Tree-based ortholog | 1-to-1 | MT7G077410 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G077410 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G03690 OS09G39570 | 2 | |
Tree-based ortholog | 1-to-1 | OS09G39570 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS09G39570 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | 1-to-many | OL03G03150 OL02G00250 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL03G03150 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00009G01520 PP00016G01440 PP00121G00680 | 3 | |
Tree-based ortholog | 1-to-1 | PP00121G00680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00121G00680 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT02G15930 PT03G10650 PT14G08370 | 3 | |
Tree-based ortholog | 1-to-1 | PT14G08380 | 1 | ||
Anchor point | 1-to-many | PT14G08370 PT02G15930 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT14G08380 | 1 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_002G16530 PPE_002G16540 PPE_005G01400 | 3 | |
Tree-based ortholog | 1-to-1 | PPE_002G16540 | 1 | ||
Anchor point | 1-to-1 | PPE_002G16530 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G16540 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29827G01060 RC30174G02800 | 2 | |
Tree-based ortholog | 1-to-1 | RC30174G02810 | 1 | ||
Anchor point | 1-to-1 | RC30174G02800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30174G02810 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G094580 SL08G005780 | 2 | |
Tree-based ortholog | 1-to-1 | SL01G094580 | 1 | ||
Anchor point | 1-to-1 | SL01G094580 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G094580 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G031940 ST08G006590 | 2 | |
Tree-based ortholog | 1-to-1 | ST01G031940 | 1 | ||
Anchor point | 1-to-1 | ST01G031940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G031940 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP4G27950 TP6G00530 | 2 | |
Tree-based ortholog | 1-to-1 | TP6G00530 | 1 | ||
Anchor point | 1-to-many | TP4G27950 TP6G00530 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G00530 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G35660 TC0003G31610 | 2 | |
Tree-based ortholog | 1-to-1 | TC0001G35650 | 1 | ||
Anchor point | 1-to-1 | TC0001G35650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G35650 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV02G09430 VV15G04870 | 2 | |
Tree-based ortholog | 1-to-1 | VV15G04890 | 1 | ||
Anchor point | 1-to-1 | VV15G04890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV15G04890 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM04G40810 ZM07G09300 | 2 | |
Tree-based ortholog | 1-to-1 | ZM07G09300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM07G09300 | 1 |