Integrative Orthology Viewer: AT4G00380 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G15910 AT1G80790 AT4G00380 | 3 | |
Tree-based ortholog | AT1G15910 AT4G00380 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | AT1G15910 AT4G00380 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | many-to-many | ATR_00012G01770 ATR_02578G00010 ATR_00010G01300 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ATR_00012G01830 ATR_00012G01750 | 2 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL1G16810 | 1 | |
Tree-based ortholog | many-to-1 | AL1G16810 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL1G16810 | 1 | ||
Beta vulgaris | Tree-based ortholog | many-to-many | BV5G11380 BV5G11390 BV5G11370 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | BV5G11370 BV5G11390 | 2 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR07G18260 BR09G47330 | 2 | |
Tree-based ortholog | many-to-1 | BR06G11220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR06G11220 | 1 | ||
Capsella rubella | Tree-based ortholog | many-to-1 | CRU_001G15010 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_001G15010 | 1 | ||
Carica papaya | Tree-based ortholog | many-to-1 | CP00010G00760 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00010G00760 | 1 | ||
Citrullus lanatus | Tree-based ortholog | many-to-1 | CL09G09150 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL09G09150 | 1 | ||
Citrus sinensis | Tree-based ortholog | many-to-1 | CS00546G00120 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00546G00120 | 1 | ||
Cucumis melo | Tree-based ortholog | many-to-many | CM00061G00400 CM00032G01020 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | CM00061G00400 CM00032G01020 | 2 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0006G33710 | 1 | |
Tree-based ortholog | many-to-1 | EG0006G33710 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0006G33710 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV6G24800 | 1 | |
Tree-based ortholog | many-to-1 | FV6G24800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV6G24800 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM15G33660 GM15G33680 | 2 | |
Tree-based ortholog | many-to-many | GM07G02740 GM08G23240 GM07G02810 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM08G23240 GM07G02740 | 2 | ||
Gossypium raimondii | Tree-based ortholog | many-to-many | GR08G05960 GR05G21690 GR09G12440 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR09G12440 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ6G013650 LJ6G015860 | 2 | |
Tree-based ortholog | many-to-many | LJ6G015860 LJ6G013650 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | LJ6G015860 LJ6G013650 | 2 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD01G016260 | 1 | |
Tree-based ortholog | many-to-many | MD01G016270 MD03G011990 MD00G361410 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD01G016270 MD03G011990 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME08446G00060 | 1 | |
Tree-based ortholog | many-to-many | ME09492G00050 ME09492G00060 ME09492G00040 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME09492G00040 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT4G006760 MT4G125920 MT4G131310 ... | 4 | |
Tree-based ortholog | many-to-many | MT4G131310 MT4G125920 MT4G131350 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MT4G131350 MT4G006760 MT4G125920 | 3 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | many-to-many | OS05G06130 OS07G02240 OS01G03570 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G44230 | 1 | ||
Physcomitrella patens | Tree-based ortholog | many-to-many | PP00063G00810 PP00228G00220 PP00228G00230 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00228G00230 PP00228G00220 PP00374G00020 | 3 | ||
Populus trichocarpa | Orthologous gene family | many-to-1 | PT03G18100 | 1 | |
Tree-based ortholog | many-to-1 | PT03G18100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT03G18100 | 1 | ||
Prunus persica | Tree-based ortholog | many-to-1 | PPE_003G08390 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_003G08390 | 1 | ||
Ricinus communis | Tree-based ortholog | many-to-1 | RC29588G00140 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29588G00140 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL03G117040 | 1 | |
Tree-based ortholog | many-to-1 | SL03G117040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL03G117040 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST03G030490 | 1 | |
Tree-based ortholog | many-to-many | ST03G030500 ST03G030490 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST06G011440 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G14210 TP5G34970 | 2 | |
Tree-based ortholog | many-to-1 | TP1G14210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP1G14210 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0010G03800 | 1 | |
Tree-based ortholog | many-to-1 | TC0006G03870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0006G03870 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV11G00710 | 1 | |
Tree-based ortholog | many-to-many | VV11G00710 VV11G00720 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV11G00720 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM10G10490 | 1 | |
Tree-based ortholog | many-to-many | ZM01G45850 ZM03G36850 ZM03G06340 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM10G10490 | 1 |