Integrative Orthology Viewer: AT3G61940 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT3G61940 | 1 | |
Tree-based ortholog | AT3G61940 | 1 | ||
Anchor point | AT2G46800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT3G61940 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00069G00810 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00069G00810 | 1 | ||
Arabidopsis lyrata | Tree-based ortholog | 1-to-1 | AL5G32880 | 1 | |
Anchor point | 1-to-many | AL4G34970 AL5G32880 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G32880 | 1 | ||
Beta vulgaris | Tree-based ortholog | 1-to-1 | BV1G04140 | 1 | |
Anchor point | 1-to-1 | BV1G04140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV1G04140 | 1 | ||
Brassica rapa | Tree-based ortholog | 1-to-many | BR05G00980 BR04G27840 BR03G22800 | 3 | |
Anchor point | 1-to-many | BR05G00980 BR03G22800 BR09G41090 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G00980 | 1 | ||
Capsella rubella | Tree-based ortholog | 1-to-1 | CRU_005G27280 | 1 | |
Anchor point | 1-to-many | CRU_005G27280 CRU_004G28420 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G27280 | 1 | ||
Carica papaya | Tree-based ortholog | 1-to-1 | CP00057G00830 | 1 | |
Anchor point | 1-to-1 | CP00057G00830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00057G00830 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR03G00700 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G00700 | 1 | ||
Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL06G00910 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G00910 | 1 | ||
Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00001G05110 | 1 | |
Anchor point | 1-to-1 | CS00001G05110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00001G05110 | 1 | ||
Cucumis melo | Tree-based ortholog | 1-to-1 | CM00052G02320 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00052G02320 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0005G09140 EG0005G09190 EG0005G09160 ... | 10 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0005G09180 EG0005G09160 EG0005G09190 ... | 6 | ||
Fragaria vesca | Tree-based ortholog | 1-to-1 | FV7G04220 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G41560 | 1 | ||
Glycine max | Tree-based ortholog | 1-to-many | GM16G02030 GM07G05510 | 2 | |
Anchor point | 1-to-many | GM07G05510 GM16G02030 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM07G05510 GM16G02030 | 2 | ||
Gossypium raimondii | Tree-based ortholog | 1-to-1 | GR08G13160 | 1 | |
Anchor point | 1-to-1 | GR08G13160 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR08G13160 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-many | LJ3G035100 LJ1G075090 | 2 | |
Anchor point | 1-to-1 | LJ1G075090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G035100 | 1 | ||
Malus domestica | Tree-based ortholog | 1-to-many | MD07G014530 MD16G010540 MD00G428590 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD16G010540 MD00G428590 | 2 | ||
Manihot esculenta | Tree-based ortholog | 1-to-many | ME07571G00140 ME03581G00130 | 2 | |
Anchor point | 1-to-many | ME03581G00130 ME07571G00140 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME00977G00240 | 1 | ||
Medicago truncatula | Tree-based ortholog | 1-to-many | MT8G024240 MT2G036390 | 2 | |
Anchor point | 1-to-1 | MT8G024240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G036390 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS05G03780 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G03780 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-1 | PP00030G01660 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00102G00300 | 1 | ||
Populus trichocarpa | Tree-based ortholog | 1-to-many | PT14G10620 PT02G18010 | 2 | |
Anchor point | 1-to-many | PT14G10620 PT02G18010 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT14G10620 PT02G18010 | 2 | ||
Prunus persica | Tree-based ortholog | 1-to-1 | PPE_002G19190 | 1 | |
Anchor point | 1-to-1 | PPE_002G19190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G14220 | 1 | ||
Ricinus communis | Tree-based ortholog | 1-to-1 | RC30076G00190 | 1 | |
Anchor point | 1-to-1 | RC30076G00190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30076G00190 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL07G007060 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL07G007060 | 1 | ||
Solanum tuberosum | Tree-based ortholog | 1-to-many | ST07G007850 ST07G007810 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST07G007810 | 1 | ||
Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP5G01410 | 1 | |
Anchor point | 1-to-many | TP5G01410 TP4G28830 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G01410 | 1 | ||
Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0001G33080 | 1 | |
Anchor point | 1-to-1 | TC0001G33080 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G33080 | 1 | ||
Vitis vinifera | Tree-based ortholog | 1-to-1 | VV02G05940 | 1 | |
Anchor point | 1-to-1 | VV15G07500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV02G05940 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-many | ZM08G20710 ZM03G35040 ZM06G03540 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G20710 | 1 |