Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT3G57810
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT3G57810 | 1 |  |
| Tree-based ortholog | AT3G57810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT3G57810 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00022G03040 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00022G03040 | 1 | ||
| Anchor point | N/A | ATR_00022G03040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00022G03040 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL5G28330 | 1 | |
| Tree-based ortholog | 1-to-1 | AL5G28330 | 1 | ||
| Anchor point | N/A | AL5G28330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G28330 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV3G15870 | 1 | |
| Tree-based ortholog | 1-to-1 | BV3G15870 | 1 | ||
| Anchor point | N/A | BV3G15870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G15870 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR09G38280 | 1 | |
| Tree-based ortholog | 1-to-1 | BR09G38280 | 1 | ||
| Anchor point | N/A | BR09G38280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G38280 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_005G23300 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_005G23300 | 1 | ||
| Anchor point | N/A | CRU_005G23300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G23300 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00085G01180 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00085G01180 | 1 | ||
| Anchor point | N/A | CP00085G01180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00085G01180 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR01G10220 | 1 | |
| Citrullus lanatus | Orthologous gene family | 1-to-many | CL00G00510 CL10G15300 | 2 | |
| Tree-based ortholog | 1-to-many | CL10G15300 CL00G00510 | 2 | ||
| Anchor point | N/A | CL10G15300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CL10G15300 CL00G00510 | 2 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00092G00230 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00092G00230 | 1 | ||
| Anchor point | N/A | CS00092G00230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00092G00230 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00011G05880 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00011G05880 | 1 | ||
| Anchor point | N/A | CM00011G05880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00011G05880 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0001G20310 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0001G20310 | 1 | ||
| Anchor point | N/A | EG0001G20310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G20310 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV6G45060 | 1 | |
| Anchor point | N/A | FV6G45060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | FV2G34810 FV6G45060 | 2 | ||
| Glycine max | Orthologous gene family | 1-to-1 | GM10G12180 | 1 | |
| Tree-based ortholog | 1-to-1 | GM10G12180 | 1 | ||
| Anchor point | N/A | GM10G12180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM10G12180 | 1 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR06G14010 | 1 | |
| Tree-based ortholog | 1-to-1 | GR06G14010 | 1 | ||
| Anchor point | N/A | GR06G14010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G14010 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G022360 | 1 | |
| Malus domestica | Orthologous gene family | 1-to-many | MD14G005440 MD14G005460 | 2 | |
| Tree-based ortholog | 1-to-many | MD14G005460 MD14G005440 | 2 | ||
| Anchor point | N/A | MD14G005440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD14G005440 MD14G005460 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME03602G00480 | 1 | |
| Tree-based ortholog | 1-to-1 | ME03602G00480 | 1 | ||
| Anchor point | N/A | ME03602G00480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03602G00480 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT1G052405 | 1 | |
| Tree-based ortholog | 1-to-many | MT1G052405 MT1G052380 | 2 | ||
| Anchor point | N/A | MT1G052380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G052405 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-many | OS08G39560 OS09G31280 | 2 | |
| Tree-based ortholog | 1-to-many | OS08G39560 OS09G31280 | 2 | ||
| Anchor point | N/A | OS09G31280 OS08G39560 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS09G31280 OS08G39560 | 2 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL16G01440 | 1 | |
| Physcomitrella patens | Orthologous gene family | 1-to-many | PP00056G00770 PP00074G01160 PP00456G00150 | 3 | |
| Tree-based ortholog | 1-to-many | PP00074G01160 PP00056G00770 PP00052G00420 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00456G00150 PP00074G01160 PP00052G00420 ... | 4 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT06G05740 PT16G05090 | 2 | |
| Tree-based ortholog | 1-to-many | PT16G05090 PT06G05740 | 2 | ||
| Anchor point | N/A | PT16G05090 PT06G05740 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT16G05090 PT06G05740 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_007G08400 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_007G08400 | 1 | ||
| Anchor point | N/A | PPE_007G08400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G08400 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC28431G00020 | 1 | |
| Tree-based ortholog | 1-to-1 | RC28431G00020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28431G00020 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL11G007590 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL11G007590 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST01G030900 | 1 | |
| Tree-based ortholog | 1-to-1 | ST01G030900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G030900 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP5G04880 | 1 | |
| Tree-based ortholog | 1-to-1 | TP5G04880 | 1 | ||
| Anchor point | N/A | TP5G04880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G04880 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0005G16740 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0005G16740 | 1 | ||
| Anchor point | N/A | TC0005G16740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G16740 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV08G08000 | 1 | |
| Tree-based ortholog | 1-to-1 | VV08G08000 | 1 | ||
| Anchor point | N/A | VV08G08000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G08000 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM01G32450 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM02G32690 | 1 | ||
| Anchor point | N/A | ZM01G32450 ZM02G32690 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G32450 | 1 |