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Integrative Orthology Viewer:
AT3G54960
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT3G54960 AT5G60640 | 2 |  |
| Tree-based ortholog | AT3G54960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT3G54960 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00175G00360 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00175G00360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00175G00360 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL5G25050 AL8G26780 | 2 | |
| Tree-based ortholog | 1-to-1 | AL5G25050 | 1 | ||
| Anchor point | N/A | AL5G25050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G25050 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV0G75730 BV9G11950 | 2 | |
| Tree-based ortholog | 1-to-1 | BV0G75730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV9G11950 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR02G11520 BR09G35880 BR10G13190 | 3 | |
| Tree-based ortholog | 1-to-1 | BR09G35880 | 1 | ||
| Anchor point | N/A | BR09G35880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G35880 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_005G20310 CRU_008G20710 | 2 | |
| Tree-based ortholog | 1-to-1 | CRU_005G20310 | 1 | ||
| Anchor point | N/A | CRU_005G20310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G20310 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00053G00730 CP00216G00100 | 2 | |
| Tree-based ortholog | 1-to-1 | CP00053G00730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00216G00100 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR02G03440 | 1 | |
| Tree-based ortholog | 1-to-1 | CR02G03440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR02G03440 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL03G02180 | 1 | |
| Tree-based ortholog | 1-to-1 | CL03G02180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G02180 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00014G02170 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00014G02170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00014G02170 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00110G00180 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00110G00180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00110G00180 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0002G20120 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0002G20120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G20120 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV3G37940 | 1 | |
| Tree-based ortholog | 1-to-1 | FV3G37940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G37940 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM11G20630 GM12G07260 GM12G29550 ... | 4 | |
| Tree-based ortholog | 1-to-many | GM12G29550 GM13G40130 GM11G20630 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM12G29550 GM13G40130 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR03G14130 GR09G10660 | 2 | |
| Tree-based ortholog | 1-to-many | GR03G14130 GR09G10660 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR03G14130 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ3G044220 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ3G044220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G044220 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G039090 MD00G339060 MD11G010400 | 3 | |
| Tree-based ortholog | 1-to-many | MD00G039090 MD11G010400 MD00G339060 ... | 4 | ||
| Anchor point | N/A | MD11G010400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G339060 MD11G010400 MD00G039090 | 3 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME03750G01040 | 1 | |
| Tree-based ortholog | 1-to-many | ME06327G00150 ME03750G01040 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03750G01040 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT2G094180 MT4G059450 | 2 | |
| Tree-based ortholog | 1-to-many | MT2G094180 MT4G059450 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G094180 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS02G01010 | 1 | |
| Tree-based ortholog | 1-to-1 | OS02G01010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G01010 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL05G02640 | 1 | |
| Tree-based ortholog | 1-to-1 | OL05G02640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL05G02640 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00003G01330 PP00039G00940 PP00046G00200 ... | 6 | |
| Tree-based ortholog | 1-to-many | PP00210G00500 PP00122G00030 PP00046G00200 ... | 9 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00407G00290 PP00422G00050 PP00003G01330 ... | 4 | ||
| Populus trichocarpa | Orthologous gene family | many-to-1 | PT09G01360 | 1 | |
| Tree-based ortholog | 1-to-1 | PT09G01360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT09G01360 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_006G09970 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_006G09970 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G09970 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC28076G00060 | 1 | |
| Tree-based ortholog | 1-to-1 | RC28076G00060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28076G00060 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL04G049450 SL06G075210 SL11G069400 | 3 | |
| Tree-based ortholog | 1-to-many | SL04G049450 SL11G069400 SL06G075210 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G049450 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST04G014070 ST11G026600 | 2 | |
| Tree-based ortholog | 1-to-many | ST04G014070 ST11G026600 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G014070 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP5G07460 TP6G22210 | 2 | |
| Tree-based ortholog | 1-to-1 | TP5G07460 | 1 | ||
| Anchor point | N/A | TP5G07460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G07460 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0009G33410 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0009G33410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G33410 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-many | VV13G03190 VV06G05350 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G05350 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM04G41820 ZM05G16720 | 2 | |
| Tree-based ortholog | 1-to-many | ZM05G16720 ZM04G41820 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM05G16720 ZM04G41820 | 2 |