Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT3G54510
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT3G54510 | 1 |  |
| Tree-based ortholog | AT3G54510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT3G54510 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00097G00100 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00044G01990 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | 1-to-1 | AL5G24570 | 1 | |
| Anchor point | N/A | AL5G24570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G24570 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV2G16390 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G16390 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-1 | BR09G35440 | 1 | |
| Anchor point | N/A | BR09G35440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G35440 | 1 | ||
| Capsella rubella | Tree-based ortholog | 1-to-1 | CRU_005G19880 | 1 | |
| Anchor point | N/A | CRU_005G19880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G19880 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00051G00990 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00051G00990 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR08G01170 CR09G01840 CR08G01110 ... | 10 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR08G01110 CR08G01140 CR08G01170 ... | 6 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL05G21860 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G21860 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00003G05590 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00003G05590 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00016G08000 | 1 | |
| Anchor point | N/A | CM00016G08000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00016G08000 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0007G26070 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G26070 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV7G17400 | 1 | |
| Anchor point | N/A | FV7G17400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G17400 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-1 | GM11G21310 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM11G21310 | 1 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-1 | GR09G29570 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G29570 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-many | LJ1G038010 LJ4G014230 LJ2G021320 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G038010 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-1 | MD11G004140 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD09G004140 MD17G004510 | 2 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-1 | ME05875G02870 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME05875G02870 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-1 | MT3G019070 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G019070 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS01G72210 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G72210 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-many | OL01G06230 OL16G01070 OL04G02150 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL04G02150 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00078G00550 PP00068G00850 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00078G00550 | 1 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-1 | PT03G20090 | 1 | |
| Anchor point | N/A | PT03G20090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT03G20090 | 1 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_002G01470 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G01470 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC30131G03650 | 1 | |
| Anchor point | N/A | RC30131G03650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30131G03650 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL01G068500 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G068500 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST01G024540 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G024540 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP5G07910 | 1 | |
| Anchor point | N/A | TP5G07910 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G07910 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0010G16850 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0010G16850 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV00G25090 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV00G25090 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-1 | ZM08G27840 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G27840 | 1 |