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Integrative Orthology Viewer:
AT3G54480
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT3G54480 | 1 |  |
| Tree-based ortholog | AT3G54480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT3G54480 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00116G00130 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00116G00130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00116G00130 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL5G24540 | 1 | |
| Tree-based ortholog | 1-to-1 | AL5G24540 | 1 | ||
| Anchor point | N/A | AL5G24540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G24540 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV2G16560 | 1 | |
| Tree-based ortholog | 1-to-1 | BV2G16560 | 1 | ||
| Anchor point | N/A | BV2G16560 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G16560 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR04G04640 BR09G35420 | 2 | |
| Tree-based ortholog | 1-to-1 | BR09G35420 | 1 | ||
| Anchor point | N/A | BR04G04640 BR09G35420 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR04G04640 BR09G35420 | 2 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_005G19850 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_005G19850 | 1 | ||
| Anchor point | N/A | CRU_005G19850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G19850 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00223G00140 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00223G00140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00223G00140 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL05G27660 | 1 | |
| Tree-based ortholog | 1-to-1 | CL05G27660 | 1 | ||
| Anchor point | N/A | CL05G27660 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G27660 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00016G08100 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00016G08100 | 1 | ||
| Anchor point | N/A | CM00016G08100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00016G08100 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0007G26050 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0007G26050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G26050 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV7G17110 | 1 | |
| Tree-based ortholog | 1-to-1 | FV7G17110 | 1 | ||
| Anchor point | N/A | FV7G17110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G17110 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-1 | GM11G21550 | 1 | |
| Tree-based ortholog | 1-to-1 | GM11G21550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM11G21550 | 1 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR12G01700 | 1 | |
| Tree-based ortholog | 1-to-1 | GR12G01700 | 1 | ||
| Anchor point | N/A | GR12G01700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR12G01700 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-1 | MD02G027280 | 1 | |
| Tree-based ortholog | 1-to-1 | MD02G027280 | 1 | ||
| Anchor point | N/A | MD02G027280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD02G027280 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME08873G00080 | 1 | |
| Tree-based ortholog | 1-to-1 | ME08873G00080 | 1 | ||
| Anchor point | N/A | ME08873G00080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME08873G00080 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT3G017610 | 1 | |
| Tree-based ortholog | 1-to-1 | MT3G017610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G017610 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS07G46555 | 1 | |
| Tree-based ortholog | 1-to-1 | OS07G46555 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G46555 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-1 | PP00072G00690 | 1 | |
| Tree-based ortholog | 1-to-1 | PP00072G00690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00072G00690 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT00G04050 PT01G02560 | 2 | |
| Tree-based ortholog | 1-to-many | PT03G19930 PT03G20040 PT00G04050 ... | 4 | ||
| Anchor point | N/A | PT01G02560 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT00G04050 PT01G02560 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_002G01660 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_002G01660 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G01660 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30131G03580 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30131G03580 | 1 | ||
| Anchor point | N/A | RC30131G03580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30131G03580 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL11G005590 | 1 | |
| Tree-based ortholog | 1-to-1 | SL11G005590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL11G005590 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST11G005990 | 1 | |
| Tree-based ortholog | 1-to-1 | ST11G005990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST11G005990 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP5G07940 | 1 | |
| Tree-based ortholog | 1-to-1 | TP5G07940 | 1 | ||
| Anchor point | N/A | TP5G07940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G07940 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0010G16420 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0010G16420 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0010G16420 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV13G00190 | 1 | |
| Tree-based ortholog | 1-to-1 | VV13G00190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G00190 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM02G40300 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM07G29370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G40300 | 1 |