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Integrative Orthology Viewer:
AT3G54280
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT3G54280 | 1 |  |
| Tree-based ortholog | AT3G54280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT3G54280 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-many | ATR_00002G01430 ATR_00012G01930 | 2 | |
| Tree-based ortholog | 1-to-many | ATR_00002G01430 ATR_00012G01920 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00002G01430 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | 1-to-many | AL3G20750 AL1G08260 AL8G30600 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G06040 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV8G08820 | 1 | |
| Tree-based ortholog | 1-to-1 | BV8G08820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV8G08820 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR09G35290 | 1 | |
| Tree-based ortholog | 1-to-1 | BR09G35290 | 1 | ||
| Anchor point | N/A | BR09G35290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G35290 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_005G19630 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_005G19630 | 1 | ||
| Anchor point | N/A | CRU_005G19630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G19630 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-many | CP00062G00190 CP00051G00160 CP00165G00150 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00073G00350 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR16G07740 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR16G07740 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-many | CL02G17910 CL05G11260 CL11G04740 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G12650 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00238G00180 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00238G00180 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-many | CM00020G01820 CM00038G01480 CM00018G00910 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00042G00470 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0004G08990 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0004G08990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0004G08990 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV3G35610 | 1 | |
| Tree-based ortholog | 1-to-1 | FV3G35610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G35610 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM09G36910 GM12G00450 | 2 | |
| Tree-based ortholog | 1-to-many | GM09G36910 GM12G00450 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM09G36910 GM12G00450 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR13G19770 | 1 | |
| Tree-based ortholog | 1-to-1 | GR13G19770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR13G19770 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ3G051710 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ3G051710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G051710 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-1 | MD14G005230 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD06G009480 | 1 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-1 | ME11297G01080 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME11297G01080 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT4G035100 | 1 | |
| Tree-based ortholog | 1-to-1 | MT4G035100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G035100 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS02G06592 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G06592 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | 1-to-1 | OL11G00420 | 1 | |
| Tree-based ortholog | 1-to-1 | OL11G00410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OL11G00420 OL11G00410 | 2 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-1 | PP00074G01090 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00074G01090 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT13G06840 | 1 | |
| Tree-based ortholog | 1-to-1 | PT13G06840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT13G06840 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_006G01890 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_006G01890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G01890 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC30148G00020 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30148G00020 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL08G074500 | 1 | |
| Tree-based ortholog | 1-to-1 | SL08G074500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL08G074500 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST08G017730 | 1 | |
| Tree-based ortholog | 1-to-1 | ST08G017730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST08G017730 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP5G08110 | 1 | |
| Tree-based ortholog | 1-to-1 | TP5G08110 | 1 | ||
| Anchor point | N/A | TP5G08110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G08110 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0005G23690 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0005G23690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G23690 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV15G03050 | 1 | |
| Tree-based ortholog | 1-to-1 | VV15G03050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV15G03050 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM06G32310 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM06G32310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM06G32310 | 1 |