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Integrative Orthology Viewer:
AT3G54270
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT3G54270 | 1 |  |
| Tree-based ortholog | AT3G54270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT3G54270 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00004G01650 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00004G01650 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | 1-to-1 | AL5G24330 | 1 | |
| Anchor point | N/A | AL5G24330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G24330 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV0G32850 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G20010 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-many | BR04G04770 BR09G35280 | 2 | |
| Anchor point | N/A | BR09G35280 BR04G04770 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G35280 | 1 | ||
| Capsella rubella | Tree-based ortholog | 1-to-1 | CRU_005G19620 | 1 | |
| Anchor point | N/A | CRU_005G19620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G19620 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00036G00920 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00036G00920 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR06G09770 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR00G00450 CR06G09770 | 2 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL05G23120 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G16070 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00264G00100 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00018G01370 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00016G06590 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00011G05060 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0007G20790 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G21440 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV7G00180 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G28390 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-1 | GM20G16990 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM20G16990 | 1 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-1 | GR09G30190 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G30190 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-1 | MD02G024690 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD02G024690 | 1 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-1 | ME02369G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME02892G01080 ME08542G00570 | 2 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-1 | MT1G040560 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G040560 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS05G05270 OS01G27880 OS02G05030 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS05G05270 OS02G05030 | 2 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL01G03030 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL01G03030 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00150G00410 PP00058G01230 PP00292G00020 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00150G00410 PP00058G01230 PP00162G00480 ... | 4 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-1 | PT08G01330 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT08G01330 | 1 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_005G00200 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G00200 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC29333G00460 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29333G00460 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL10G081660 SL01G006740 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G081660 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-many | ST10G026460 ST01G007310 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G026460 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP5G08120 | 1 | |
| Anchor point | N/A | TP5G08120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G08120 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0005G10850 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0010G12140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0010G12140 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-many | VV12G08570 VV08G01180 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV08G01180 VV12G08570 | 2 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM10G12270 ZM08G17540 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM10G12270 | 1 |