Integrative Orthology Viewer: AT3G53640 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G13350 AT3G25840 AT3G53640 | 3 | |
Tree-based ortholog | AT3G53640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT3G53640 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00002G00620 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00002G00620 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00002G00620 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL5G04340 AL5G23690 | 2 | |
Tree-based ortholog | 1-to-1 | AL5G23690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G23690 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV6G00430 | 1 | |
Tree-based ortholog | 1-to-1 | BV6G00430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G00430 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR06G33990 BR09G20860 | 2 | |
Tree-based ortholog | 1-to-many | BR06G33990 BR09G20860 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G20860 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_005G03340 CRU_005G19010 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_005G19010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G19010 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP32989G00010 | 1 | |
Tree-based ortholog | 1-to-many | CP32989G00010 CP00001G01830 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP32989G00010 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR06G00040 | 1 | |
Tree-based ortholog | 1-to-1 | CR06G00040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G00040 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL05G23900 | 1 | |
Tree-based ortholog | 1-to-1 | CL05G23900 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G23900 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00019G00470 | 1 | |
Tree-based ortholog | 1-to-1 | CS00019G00470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00019G00470 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00016G05680 | 1 | |
Tree-based ortholog | 1-to-1 | CM00016G05680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00016G05680 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0002G24780 | 1 | |
Tree-based ortholog | 1-to-1 | EG0002G24780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G24780 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV0G01890 | 1 | |
Tree-based ortholog | 1-to-many | FV7G29520 FV5G15970 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G01890 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G20811 GM10G42220 GM20G24820 | 3 | |
Tree-based ortholog | 1-to-many | GM10G42220 GM20G24820 GM01G20811 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM10G42220 GM20G24820 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR13G08170 | 1 | |
Tree-based ortholog | 1-to-1 | GR13G08170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR13G08170 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-many | LJ2G042200 LJ4G019390 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G042200 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G433690 MD00G433750 MD16G001830 | 3 | |
Tree-based ortholog | 1-to-many | MD00G433750 MD00G433690 MD16G001830 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G433750 MD16G001830 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME06005G00210 ME08359G00250 | 2 | |
Tree-based ortholog | 1-to-many | ME08359G00250 ME06005G00210 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME08359G00250 ME06005G00210 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT1G111180 | 1 | |
Tree-based ortholog | 1-to-1 | MT1G111180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G111180 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS12G44330 | 1 | |
Tree-based ortholog | 1-to-1 | OS12G44330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS12G44330 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL01G05830 | 1 | |
Tree-based ortholog | 1-to-1 | OL01G05830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL01G05830 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00213G00620 PP00250G00110 | 2 | |
Tree-based ortholog | 1-to-many | PP00250G00110 PP00213G00620 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00250G00110 PP00213G00620 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT08G11910 PT10G12690 | 2 | |
Tree-based ortholog | 1-to-many | PT10G12690 PT08G11910 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT08G11910 PT10G12690 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_001G31840 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_001G31840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G31840 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC28883G00120 | 1 | |
Tree-based ortholog | 1-to-1 | RC28883G00120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28883G00120 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL05G009540 | 1 | |
Tree-based ortholog | 1-to-1 | SL05G009540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G009540 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST05G007780 ST06G006980 | 2 | |
Tree-based ortholog | 1-to-many | ST05G007780 ST06G006980 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G007780 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP2G15070 | 1 | |
Tree-based ortholog | 1-to-1 | TP2G15070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G15070 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0002G35530 | 1 | |
Tree-based ortholog | 1-to-1 | TC0002G35530 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G35530 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV01G07930 | 1 | |
Tree-based ortholog | 1-to-1 | VV01G07930 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV01G07930 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G30800 ZM03G14140 | 2 | |
Tree-based ortholog | 1-to-many | ZM03G14140 ZM01G30800 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM03G14140 ZM01G30800 | 2 |