Integrative Orthology Viewer: AT3G51490 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT3G51490 AT4G35300 | 2 | |
Tree-based ortholog | AT4G35300 AT3G51490 AT1G20840 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | AT3G51490 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00044G00820 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00044G00820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00044G00820 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL7G05590 | 1 | |
Tree-based ortholog | many-to-many | AL1G22040 AL7G05590 | 2 | ||
Anchor point | N/A | AL7G05590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G05590 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV5G01620 BV6G13890 BV9G03840 | 3 | |
Tree-based ortholog | many-to-many | BV6G13890 BV1G00690 BV5G01620 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G13890 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-1 | BR01G02980 | 1 | |
Tree-based ortholog | many-to-many | BR09G33200 BR08G24960 BR01G02980 ... | 5 | ||
Anchor point | N/A | BR09G33200 BR01G02980 BR08G24960 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G21510 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_007G04670 | 1 | |
Tree-based ortholog | many-to-many | CRU_005G16750 CRU_001G19460 CRU_007G04670 | 3 | ||
Anchor point | N/A | CRU_005G16750 CRU_007G04670 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G16750 | 1 | ||
Carica papaya | Tree-based ortholog | many-to-many | CP00026G01080 CP00026G01130 CP01828G00010 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00091G00440 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR17G10000 | 1 | |
Citrullus lanatus | Orthologous gene family | many-to-many | CL00G05730 CL00G05740 CL01G21170 ... | 4 | |
Tree-based ortholog | many-to-many | CL00G00020 CL00G05750 CL01G21170 ... | 6 | ||
Anchor point | N/A | CL01G21170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G21170 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00002G07020 CS00023G02120 | 2 | |
Tree-based ortholog | many-to-many | CS00002G07020 CS00023G02120 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00002G07020 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00007G10160 CM00020G00360 CM00096G00280 | 3 | |
Tree-based ortholog | many-to-many | CM00096G00280 CM00020G00360 CM00007G10160 | 3 | ||
Anchor point | N/A | CM00007G10160 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00007G10160 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0006G30530 EG0007G13980 | 2 | |
Tree-based ortholog | many-to-many | EG0006G14760 EG0006G30530 EG0009G18600 ... | 6 | ||
Anchor point | N/A | EG0009G18590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G14760 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV2G12300 | 1 | |
Tree-based ortholog | many-to-many | FV1G11900 FV5G28750 FV2G12300 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G12300 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM02G48150 GM04G01660 GM06G00220 ... | 5 | |
Tree-based ortholog | many-to-many | GM16G21570 GM01G36145 GM02G48150 ... | 9 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM04G01660 GM06G01750 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR02G11340 GR12G13900 GR13G06420 | 3 | |
Tree-based ortholog | many-to-many | GR02G11340 GR02G01440 GR12G13900 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR02G11340 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G041920 LJ1G044070 | 2 | |
Tree-based ortholog | many-to-many | LJ1G044070 LJ1G041920 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G041920 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G062350 MD00G359120 | 2 | |
Tree-based ortholog | many-to-many | MD15G031710 MD01G014000 MD00G070990 ... | 20 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G284480 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME01895G00050 ME02040G00090 ME02943G01220 ... | 4 | |
Tree-based ortholog | many-to-many | ME02040G00090 ME02943G01220 ME06512G02130 ... | 6 | ||
Anchor point | N/A | ME06512G02120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME02040G00090 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT3G116060 MT3G118530 | 2 | |
Tree-based ortholog | many-to-many | MT5G028590 MT3G116060 MT8G073100 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G116060 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS02G13560 | 1 | |
Tree-based ortholog | many-to-many | OS02G13560 OS02G58530 OS11G28610 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G13560 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL03G02270 | 1 | |
Physcomitrella patens | Tree-based ortholog | many-to-many | PP00158G00760 PP00408G00010 PP00047G01220 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00408G00010 PP00158G00760 PP00012G00730 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT02G00620 PT04G20710 PT05G25540 ... | 4 | |
Tree-based ortholog | many-to-many | PT09G16850 PT05G09890 PT04G20710 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT09G16850 PT04G20710 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_005G00690 PPE_008G19750 | 2 | |
Tree-based ortholog | many-to-many | PPE_005G00690 PPE_008G19750 PPE_007G20670 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G20670 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC28592G00100 RC30100G00090 RC30170G07240 | 3 | |
Tree-based ortholog | many-to-many | RC30100G00090 RC30170G07240 RC28592G00100 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30170G07240 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G032040 SL04G082700 | 2 | |
Tree-based ortholog | many-to-many | SL04G082700 SL03G032040 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G082700 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G049830 ST02G025770 ST03G008700 ... | 4 | |
Tree-based ortholog | many-to-many | ST01G049820 ST03G008700 ST01G049830 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G036180 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP5G10750 TP7G33100 | 2 | |
Tree-based ortholog | many-to-many | TP7G33100 TP5G10750 TP1G18540 | 3 | ||
Anchor point | N/A | TP5G10750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G10750 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0002G14050 TC0008G06230 | 2 | |
Tree-based ortholog | many-to-many | TC0002G14050 TC0008G06230 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0008G06230 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV07G07030 | 1 | |
Tree-based ortholog | many-to-many | VV03G03330 VV18G12650 VV07G07030 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV03G03330 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G20150 ZM05G26830 ZM10G22930 | 3 | |
Tree-based ortholog | many-to-many | ZM05G26830 ZM01G20150 ZM05G16390 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G20150 | 1 |