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Integrative Orthology Viewer:
AT3G49940
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT3G49940 | 1 |  |
| Tree-based ortholog | AT3G49940 | 1 | ||
| Anchor point | AT4G37540 AT5G67420 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT3G49940 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00137G00390 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00137G00390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00137G00390 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL5G19360 | 1 | |
| Tree-based ortholog | 1-to-1 | AL5G19360 | 1 | ||
| Anchor point | many-to-many | AL5G19360 AL7G03100 AL8G33030 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G19360 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV6G23370 | 1 | |
| Tree-based ortholog | 1-to-1 | BV6G23370 | 1 | ||
| Anchor point | many-to-1 | BV6G23370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G23370 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR03G41410 BR09G31970 | 2 | |
| Tree-based ortholog | 1-to-many | BR09G31970 BR03G41410 | 2 | ||
| Anchor point | many-to-many | BR07G11070 BR09G31970 BR02G41380 ... | 7 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR09G31970 BR03G41410 | 2 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_005G15240 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_005G15240 | 1 | ||
| Anchor point | many-to-many | CRU_008G26220 CRU_007G02540 CRU_005G15240 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G15240 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00006G00390 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00006G00390 | 1 | ||
| Anchor point | many-to-1 | CP00021G01000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00006G00390 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL01G17730 | 1 | |
| Tree-based ortholog | 1-to-1 | CL01G17730 | 1 | ||
| Anchor point | many-to-many | CL01G17730 CL05G21660 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G17730 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00006G01170 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00006G01170 | 1 | ||
| Anchor point | many-to-many | CS00084G00240 CS00006G01170 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00006G01170 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00007G06480 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00007G06480 | 1 | ||
| Anchor point | many-to-many | CM00029G01850 CM00007G06480 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00007G06480 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0008G18430 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0008G18430 | 1 | ||
| Anchor point | many-to-many | EG0006G00960 EG0008G18430 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G18430 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV0G18970 | 1 | |
| Tree-based ortholog | 1-to-1 | FV0G18970 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G18970 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM01G40010 GM11G05280 | 2 | |
| Tree-based ortholog | 1-to-many | GM01G40010 GM11G05280 GM17G17540 ... | 4 | ||
| Anchor point | many-to-many | GM04G04750 GM11G05280 GM10G40421 ... | 6 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM11G05280 GM01G40010 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR07G22200 GR08G08110 | 2 | |
| Tree-based ortholog | 1-to-many | GR07G22200 GR08G08110 GR07G05630 | 3 | ||
| Anchor point | many-to-many | GR08G08110 GR05G23250 GR07G05630 ... | 6 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G22200 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ4G015120 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ4G015120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G015120 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD00G351040 MD00G351050 MD02G016340 ... | 4 | |
| Tree-based ortholog | 1-to-many | MD00G351050 MD15G023440 MD02G016340 | 3 | ||
| Anchor point | many-to-many | MD08G010060 MD15G023440 MD02G016340 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD15G023440 MD00G351050 MD02G016340 | 3 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME03363G00170 ME10878G00160 | 2 | |
| Tree-based ortholog | 1-to-many | ME03363G00170 ME10878G00160 | 2 | ||
| Anchor point | many-to-many | ME03363G00170 ME09870G00250 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME03363G00170 ME10878G00160 | 2 | ||
| Medicago truncatula | Orthologous gene family | 1-to-many | MT4G095600 MT5G015880 | 2 | |
| Tree-based ortholog | 1-to-many | MT5G015880 MT4G095600 | 2 | ||
| Anchor point | many-to-many | MT5G015880 MT4G095600 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G095600 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS03G33090 | 1 | |
| Tree-based ortholog | 1-to-many | OS07G40000 OS03G33090 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS07G40000 OS03G33090 | 2 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00167G00190 PP00019G00960 PP00041G00240 ... | 7 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00041G00240 PP00203G00160 PP00167G00190 ... | 4 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT00G01630 PT05G14550 PT07G05360 | 3 | |
| Tree-based ortholog | 1-to-many | PT07G05360 PT00G01630 PT05G14550 | 3 | ||
| Anchor point | many-to-many | PT14G01740 PT02G11940 PT09G08960 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT00G01630 PT07G05360 PT05G14550 | 3 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_006G23200 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_006G23200 | 1 | ||
| Anchor point | many-to-1 | PPE_006G23200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G23200 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29661G00040 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29661G00040 | 1 | ||
| Anchor point | many-to-many | RC29661G00040 RC30170G01170 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29661G00040 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL02G092550 | 1 | |
| Tree-based ortholog | 1-to-1 | SL02G092550 | 1 | ||
| Anchor point | many-to-many | SL02G092550 SL04G077990 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G092550 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST02G031040 | 1 | |
| Tree-based ortholog | 1-to-1 | ST02G031040 | 1 | ||
| Anchor point | many-to-many | ST04G031010 ST01G044380 ST02G031040 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G031040 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP5G12170 | 1 | |
| Tree-based ortholog | 1-to-1 | TP5G12170 | 1 | ||
| Anchor point | many-to-many | TP5G12170 TP7G35220 TP2G29230 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G12170 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0001G06700 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0001G06700 | 1 | ||
| Anchor point | many-to-many | TC0002G11040 TC0001G06700 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G06700 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV07G00320 | 1 | |
| Tree-based ortholog | 1-to-1 | VV07G00320 | 1 | ||
| Anchor point | many-to-many | VV03G10000 VV07G00320 VV18G06090 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV07G00320 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM02G38100 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM02G38100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G38100 | 1 |