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Integrative Orthology Viewer:
AT3G48040
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT3G48040 | 1 |  |
| Tree-based ortholog | AT3G48040 | 1 | ||
| Anchor point | AT5G62880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT3G48040 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00088G00810 | 1 | |
| Anchor point | 1-to-1 | ATR_00088G00810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00088G00810 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL5G16860 | 1 | |
| Tree-based ortholog | 1-to-1 | AL5G16860 | 1 | ||
| Anchor point | 1-to-many | AL8G29390 AL5G16860 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G16860 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV5G02420 | 1 | |
| Anchor point | 1-to-1 | BV5G02420 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G02420 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-many | BR02G38980 BR06G29400 BR09G06110 | 3 | |
| Anchor point | 1-to-many | BR09G06110 BR06G29400 BR02G38980 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G29400 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_005G13270 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_005G13270 | 1 | ||
| Anchor point | 1-to-many | CRU_005G13270 CRU_008G22950 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G13270 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00110G00300 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00110G00300 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR09G05770 | 1 | |
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL06G17400 | 1 | |
| Anchor point | 1-to-1 | CL06G17400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G17400 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00020G01750 | 1 | |
| Anchor point | 1-to-1 | CS00020G01750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00020G01750 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00030G00310 | 1 | |
| Anchor point | 1-to-1 | CM00030G00310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00030G00310 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0002G02940 | 1 | |
| Tree-based ortholog | 1-to-many | EG0002G02940 EG0011G24060 | 2 | ||
| Anchor point | 1-to-1 | EG0011G24060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G02940 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV5G17420 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G17420 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM05G01920 GM17G09980 GM04G35110 ... | 4 | |
| Anchor point | 1-to-many | GM17G09980 GM05G01920 GM04G35110 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM04G35110 GM06G19630 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-1 | GR08G29720 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR08G29720 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ1G006210 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G006210 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD14G018250 MD00G390380 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD14G018250 | 1 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-many | ME12794G01260 ME04083G00340 | 2 | |
| Anchor point | 1-to-many | ME12794G01260 ME04083G00340 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME12794G01260 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-1 | MT3G078260 | 1 | |
| Anchor point | 1-to-1 | MT3G078260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G078260 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS02G50860 OS06G12790 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G50860 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL06G02920 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL06G02920 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00051G00550 PP00126G00680 PP00257G00470 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00257G00470 PP00051G00550 PP00126G00680 ... | 4 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT12G07780 PT15G07300 | 2 | |
| Anchor point | 1-to-many | PT15G07300 PT12G07780 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT15G07300 PT12G07780 | 2 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_005G18320 | 1 | |
| Anchor point | 1-to-1 | PPE_005G18320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G18320 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC30147G06620 | 1 | |
| Anchor point | 1-to-1 | RC30147G06620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30147G06620 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL03G114070 | 1 | |
| Anchor point | 1-to-1 | SL03G114070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G114070 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST03G027430 | 1 | |
| Anchor point | 1-to-1 | ST03G027430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G027430 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP2G26020 | 1 | |
| Anchor point | 1-to-1 | TP2G26020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G26020 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0003G00630 | 1 | |
| Anchor point | 1-to-1 | TC0003G00630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G00630 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV17G02170 | 1 | |
| Anchor point | 1-to-1 | VV17G02170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV17G02170 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM04G27970 ZM09G00600 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM09G00600 | 1 |