Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT3G46040
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT3G46040 | 1 |  |
| Tree-based ortholog | AT3G46040 | 1 | ||
| Anchor point | AT5G59850 AT1G07770 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT3G46040 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00168G00060 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00168G00060 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | 1-to-many | AL5G14290 AL1G07390 AL8G26040 | 3 | |
| Anchor point | many-to-many | AL8G26040 AL5G14290 AL1G07390 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | AL8G26040 AL5G14290 AL1G07390 | 3 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-many | BV2G03280 BV7G07020 | 2 | |
| Anchor point | many-to-1 | BV7G07020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G03280 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-many | BR08G30080 BR03G10250 BR10G12590 ... | 4 | |
| Anchor point | many-to-many | BR02G11930 BR03G10250 BR10G12590 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G10250 | 1 | ||
| Capsella rubella | Tree-based ortholog | 1-to-many | CRU_008G20030 CRU_005G11190 CRU_001G06750 | 3 | |
| Anchor point | many-to-many | CRU_001G06750 CRU_005G11190 CRU_008G20030 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CRU_001G06750 CRU_005G11190 CRU_008G20030 | 3 | ||
| Carica papaya | Tree-based ortholog | 1-to-many | CP00001G03500 CP00190G00250 | 2 | |
| Anchor point | many-to-1 | CP00190G00250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00190G00250 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR05G02710 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR05G02710 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-many | CL09G20420 CL03G01940 | 2 | |
| Anchor point | many-to-1 | CL03G01940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CL03G01940 CL09G20420 | 2 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-many | CS00014G00890 CS00024G00830 | 2 | |
| Anchor point | many-to-1 | CS00014G00890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CS00024G00830 CS00014G00890 | 2 | ||
| Cucumis melo | Tree-based ortholog | 1-to-many | CM00119G00130 CM00044G02420 | 2 | |
| Anchor point | many-to-1 | CM00044G02420 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00119G00130 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0001G00660 EG0007G23120 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0007G23120 EG0001G00660 | 2 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-many | FV0G31880 FV7G27250 | 2 | |
| Anchor point | many-to-1 | FV0G31880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G31880 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM15G10950 GM11G00600 GM11G00590 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM07G38520 GM17G02200 GM11G00590 ... | 5 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-many | GR11G23020 GR03G13610 GR13G26500 ... | 6 | |
| Anchor point | many-to-many | GR09G10130 GR03G13610 GR13G26500 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR03G13610 GR13G26500 | 2 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-many | LJ6G023040 LJ1G001070 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G001070 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD11G008430 MD00G359300 MD00G106280 ... | 4 | |
| Anchor point | many-to-many | MD11G008430 MD03G007450 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD11G008430 MD00G359300 | 2 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-many | ME07168G00060 ME06705G00530 ME10015G00140 ... | 4 | |
| Anchor point | many-to-1 | ME07168G00060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME07168G00060 ME02947G00060 ME10015G00140 ... | 4 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-many | MT4G117470 MT1G105415 MT4G094598 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G117470 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS02G27760 OS07G10720 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS07G10720 OS02G27760 | 2 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL01G02380 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL01G02380 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00115G00350 PP00426G00140 PP00041G00470 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00001G01280 PP00041G00470 PP00115G00350 ... | 6 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT03G11480 PT10G20870 PT01G11810 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT08G05190 | 1 | ||
| Prunus persica | Tree-based ortholog | 1-to-many | PPE_006G08210 PPE_002G22200 | 2 | |
| Anchor point | many-to-many | PPE_002G22200 PPE_006G08210 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PPE_002G22200 PPE_006G08210 | 2 | ||
| Ricinus communis | Tree-based ortholog | 1-to-many | RC30125G00160 RC29585G00360 RC29154G00090 | 3 | |
| Anchor point | many-to-1 | RC29154G00090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29585G00360 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL12G044730 SL03G121370 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G121370 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST04G023000 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ST06G018770 ST04G025110 ST04G025120 | 3 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-many | TP5G15560 TP1G06420 TP6G21540 | 3 | |
| Anchor point | many-to-many | TP5G15560 TP6G21540 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | TP5G15560 TP6G21540 TP1G06420 | 3 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-many | TC0009G32150 TC0010G10130 TC0010G10150 | 3 | |
| Anchor point | many-to-1 | TC0009G32150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | TC0010G10150 TC0009G32150 TC0010G10130 | 3 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-many | VV08G02390 VV13G05670 | 2 | |
| Anchor point | many-to-1 | VV13G05670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G05670 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM07G06390 ZM09G15130 ZM04G32190 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G00580 | 1 |