Integrative Orthology Viewer: AT3G29590 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT3G29590 AT5G39050 AT5G39080 ... | 4 | |
Tree-based ortholog | AT3G29590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT3G29590 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-many | ATR_00025G03470 ATR_00025G03480 ATR_00169G00070 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00025G03480 ATR_00025G03470 | 2 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL5G09290 AL5G09300 AL5G09390 ... | 6 | |
Tree-based ortholog | 1-to-1 | AL5G09290 | 1 | ||
Anchor point | N/A | AL7G39390 AL5G09290 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G09290 | 1 | ||
Beta vulgaris | Tree-based ortholog | 1-to-1 | BV6G13840 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G13840 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR04G08660 BR04G11340 BR04G11350 | 3 | |
Tree-based ortholog | 1-to-1 | BR09G04260 | 1 | ||
Anchor point | N/A | BR02G31530 BR04G08660 BR06G31610 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G04260 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_006G14940 CRU_007G35470 CRU_007G35480 ... | 4 | |
Tree-based ortholog | 1-to-1 | CRU_005G07620 | 1 | ||
Anchor point | N/A | CRU_007G35460 CRU_005G07620 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G07620 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00014G01870 CP00383G00010 CP00383G00030 ... | 6 | |
Tree-based ortholog | 1-to-many | CP41253G00010 CP00014G01870 CP00383G00050 ... | 6 | ||
Anchor point | N/A | CP00014G01870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CP00383G00040 CP00383G00010 CP00014G01870 ... | 5 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL11G14100 | 1 | |
Tree-based ortholog | 1-to-many | CL11G14100 CL09G15530 | 2 | ||
Anchor point | N/A | CL11G14100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G14100 | 1 | ||
Citrus sinensis | Tree-based ortholog | 1-to-many | CS00189G00130 CS00015G02620 CS00106G00360 ... | 9 | |
Anchor point | N/A | CS00015G02620 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CS05403G00010 CS01611G00010 | 2 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00044G02120 CM00044G02130 CM00044G02140 ... | 4 | |
Tree-based ortholog | 1-to-1 | CM00051G00770 | 1 | ||
Anchor point | N/A | CM00051G00770 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00051G00770 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0011G07510 EG0009G04750 EG0011G07530 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0011G07560 EG0011G07540 EG0011G07530 ... | 5 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV6G42350 FV7G19870 FV7G19880 | 3 | |
Tree-based ortholog | 1-to-many | FV7G19870 FV7G19880 FV6G42370 ... | 11 | ||
Anchor point | N/A | FV6G42350 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G42390 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM08G27120 GM18G49240 GM18G50310 ... | 5 | |
Tree-based ortholog | 1-to-many | GM08G27120 GM18G50330 GM18G50320 ... | 5 | ||
Anchor point | N/A | GM18G50310 GM19G03730 GM13G06230 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM18G50310 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G26560 GR01G26570 GR01G26580 ... | 5 | |
Tree-based ortholog | 1-to-1 | GR12G11900 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR01G26560 GR01G26580 GR01G26570 | 3 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G038540 LJ1G038570 LJ1G038590 ... | 4 | |
Tree-based ortholog | 1-to-many | LJ1G038570 LJ1G038610 LJ1G038590 ... | 4 | ||
Anchor point | N/A | LJ1G038540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G038540 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G044010 MD09G004820 | 2 | |
Tree-based ortholog | 1-to-many | MD00G186550 MD00G366820 MD00G332450 ... | 26 | ||
Anchor point | N/A | MD09G004820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G402090 MD17G006080 MD00G186550 ... | 9 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME04043G02050 ME06609G00100 ME06609G00110 ... | 4 | |
Tree-based ortholog | 1-to-1 | ME06609G00090 | 1 | ||
Anchor point | N/A | ME04043G02040 ME06609G00010 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME06609G00110 ME06609G00100 ME04043G02050 | 3 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT7G013850 MT7G014160 MT7G014200 ... | 5 | |
Tree-based ortholog | 1-to-many | MT7G014670 MT7G014160 MT7G014620 ... | 8 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT7G014200 MT7G014610 MT7G014160 | 3 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS07G23150 | 1 | |
Tree-based ortholog | 1-to-many | OS02G28200 OS02G28240 OS02G28170 ... | 12 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G57480 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00266G00190 PP00275G00350 PP00064G00170 | 3 | |
Populus trichocarpa | Orthologous gene family | many-to-many | PT00G10620 PT00G10670 PT00G10720 ... | 13 | |
Tree-based ortholog | 1-to-many | PT04G10980 PT00G10670 PT04G11040 ... | 26 | ||
Anchor point | N/A | PT04G12070 PT17G09470 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT04G12070 PT04G10330 PT04G10310 ... | 4 | ||
Prunus persica | Tree-based ortholog | 1-to-many | PPE_003G23380 PPE_003G23310 PPE_003G23360 ... | 17 | |
Anchor point | N/A | PPE_003G23200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PPE_003G23200 PPE_003G23230 PPE_003G23250 ... | 5 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29905G00130 RC29905G00170 | 2 | |
Tree-based ortholog | 1-to-many | RC29905G00170 RC29905G00190 RC29905G00200 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29905G00170 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL10G008680 SL12G044660 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G008680 | 1 | ||
Solanum tuberosum | Tree-based ortholog | 1-to-many | ST10G009810 ST10G009780 ST10G009840 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ST10G009840 ST12G022520 ST10G009780 ... | 4 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP7G02860 | 1 | |
Tree-based ortholog | 1-to-1 | TP2G18020 | 1 | ||
Anchor point | N/A | TP2G18020 TP7G02830 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G18020 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0004G10110 TC0004G10140 TC0004G10170 | 3 | |
Tree-based ortholog | 1-to-many | TC0004G10110 TC0004G10150 | 2 | ||
Anchor point | N/A | TC0004G10110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G10140 | 1 | ||
Vitis vinifera | Tree-based ortholog | 1-to-many | VV12G00470 VV12G00510 VV12G00480 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV12G00540 VV12G00510 VV12G00470 ... | 4 | ||
Zea mays | Tree-based ortholog | 1-to-many | ZM01G60180 ZM05G13710 ZM02G27360 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G13710 | 1 |