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Integrative Orthology Viewer:
AT3G23840
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT3G23840 AT4G13840 | 2 |  |
| Tree-based ortholog | AT3G23840 | 1 | ||
| Anchor point | AT4G13840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT3G23840 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00033G02240 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00033G02240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00033G02240 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL0G08440 AL3G26800 AL7G30770 | 3 | |
| Tree-based ortholog | 1-to-many | AL0G08440 AL3G26800 | 2 | ||
| Anchor point | 1-to-many | AL7G30770 AL3G26800 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | AL0G08440 AL3G26800 | 2 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV3G11000 | 1 | |
| Anchor point | 1-to-1 | BV3G11000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G66640 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR04G06690 BR04G06700 BR07G04720 | 3 | |
| Tree-based ortholog | 1-to-1 | BR07G04720 | 1 | ||
| Anchor point | 1-to-many | BR04G06690 BR07G04720 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR07G04720 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_003G23120 CRU_003G23130 CRU_007G27400 | 3 | |
| Tree-based ortholog | 1-to-many | CRU_003G23120 CRU_003G23130 | 2 | ||
| Anchor point | 1-to-many | CRU_007G27400 CRU_003G23120 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CRU_003G23130 CRU_003G23120 | 2 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00083G00430 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00083G00430 | 1 | ||
| Anchor point | 1-to-1 | CP00083G00430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00083G00430 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL06G07920 | 1 | |
| Tree-based ortholog | 1-to-1 | CL06G07920 | 1 | ||
| Anchor point | 1-to-1 | CL06G07920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G08760 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00202G00090 CS08290G00010 | 2 | |
| Tree-based ortholog | 1-to-many | CS00202G00090 CS08290G00010 | 2 | ||
| Anchor point | 1-to-1 | CS00202G00090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00004G03070 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00043G00900 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00043G00900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM01596G02350 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0008G21800 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0008G21800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G21800 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV4G17050 | 1 | |
| Tree-based ortholog | 1-to-1 | FV4G17050 | 1 | ||
| Anchor point | 1-to-1 | FV4G17050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G17050 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM05G28530 GM08G11560 | 2 | |
| Tree-based ortholog | 1-to-many | GM08G11560 GM05G28530 | 2 | ||
| Anchor point | 1-to-many | GM08G11560 GM05G28530 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM08G11560 GM05G28530 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR09G34980 | 1 | |
| Tree-based ortholog | 1-to-1 | GR09G34980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G34980 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ4G040690 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ4G040690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G040690 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G166320 MD09G014180 | 2 | |
| Tree-based ortholog | 1-to-many | MD09G014180 MD00G166320 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G166320 MD09G014180 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME02421G00800 | 1 | |
| Tree-based ortholog | 1-to-1 | ME02421G00800 | 1 | ||
| Anchor point | 1-to-1 | ME02421G00800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME02421G00800 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT8G081480 MT8G081600 | 2 | |
| Tree-based ortholog | 1-to-many | MT8G081600 MT8G081480 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT2G036780 MT1G035890 MT3G100150 | 3 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS04G52164 | 1 | |
| Tree-based ortholog | 1-to-1 | OS04G52164 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G52164 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00266G00190 PP00275G00350 PP00064G00170 | 3 | |
| Populus trichocarpa | Orthologous gene family | many-to-1 | PT01G31920 | 1 | |
| Tree-based ortholog | 1-to-1 | PT01G31920 | 1 | ||
| Anchor point | 1-to-1 | PT01G31920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT01G31920 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_001G15700 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_001G15700 | 1 | ||
| Anchor point | 1-to-1 | PPE_001G15700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G15700 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC28850G00010 | 1 | |
| Tree-based ortholog | 1-to-1 | RC28850G00010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29908G03100 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL09G092270 | 1 | |
| Tree-based ortholog | 1-to-1 | SL09G092270 | 1 | ||
| Anchor point | 1-to-1 | SL09G092270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G092270 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST09G028980 | 1 | |
| Tree-based ortholog | 1-to-1 | ST09G028980 | 1 | ||
| Anchor point | 1-to-1 | ST09G028980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G028980 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP3G21560 TP3G21570 TP7G11670 | 3 | |
| Tree-based ortholog | 1-to-1 | TP3G21560 | 1 | ||
| Anchor point | 1-to-many | TP3G21560 TP7G11670 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | TP3G21560 TP3G21570 | 2 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0004G20090 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0004G20090 | 1 | ||
| Anchor point | 1-to-1 | TC0004G20090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G20090 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV05G07140 | 1 | |
| Tree-based ortholog | 1-to-1 | VV05G07140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV05G07140 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM02G04800 ZM10G08280 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G04800 | 1 |