Integrative Orthology Viewer: AT3G21890 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT3G21890 | 1 | |
Tree-based ortholog | AT3G21890 | 1 | ||
Anchor point | AT4G15248 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT3G21890 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00072G00010 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00072G00010 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | 1-to-many | AL3G24050 AL3G24090 | 2 | |
Tree-based ortholog | 1-to-many | AL3G24090 AL3G24050 | 2 | ||
Anchor point | 1-to-many | AL7G28590 AL3G24050 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | AL3G24090 AL3G24050 | 2 | ||
Beta vulgaris | Tree-based ortholog | 1-to-1 | BV0G26550 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G26550 | 1 | ||
Brassica rapa | Orthologous gene family | 1-to-1 | BR01G29120 | 1 | |
Tree-based ortholog | 1-to-1 | BR01G29120 | 1 | ||
Anchor point | 1-to-1 | BR01G29120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G29120 | 1 | ||
Capsella rubella | Orthologous gene family | 1-to-1 | CRU_003G21000 | 1 | |
Tree-based ortholog | 1-to-1 | CRU_003G21000 | 1 | ||
Anchor point | 1-to-many | CRU_007G25520 CRU_003G21000 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G21000 | 1 | ||
Carica papaya | Tree-based ortholog | 1-to-1 | CP00008G02330 | 1 | |
Anchor point | 1-to-1 | CP00008G02330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00008G02330 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G09140 | 1 | |
Citrullus lanatus | Tree-based ortholog | 1-to-many | CL02G08910 CL02G00400 | 2 | |
Anchor point | 1-to-many | CL02G00400 CL02G08910 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G08910 | 1 | ||
Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00468G00120 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00468G00120 | 1 | ||
Cucumis melo | Tree-based ortholog | 1-to-many | CM00037G00390 CM00034G04330 | 2 | |
Anchor point | 1-to-many | CM00037G00390 CM00034G04330 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00037G00390 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0011G07240 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G07240 | 1 | ||
Fragaria vesca | Tree-based ortholog | 1-to-1 | FV0G18330 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G55520 | 1 | ||
Glycine max | Tree-based ortholog | 1-to-many | GM12G32230 GM13G38240 | 2 | |
Anchor point | 1-to-many | GM12G32230 GM12G11230 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM12G32230 GM13G38240 | 2 | ||
Gossypium raimondii | Tree-based ortholog | 1-to-many | GR12G13330 GR05G20900 GR08G15000 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR12G13330 GR08G15000 GR05G20900 | 3 | ||
Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ3G019300 | 1 | |
Anchor point | 1-to-1 | LJ3G019300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G019300 | 1 | ||
Malus domestica | Tree-based ortholog | 1-to-many | MD17G013030 MD00G048250 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD17G013030 MD00G048250 | 2 | ||
Manihot esculenta | Tree-based ortholog | 1-to-many | ME02630G00060 ME08974G00040 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME08974G00040 ME02630G00060 | 2 | ||
Medicago truncatula | Tree-based ortholog | 1-to-1 | MT4G046640 | 1 | |
Anchor point | 1-to-1 | MT4G046640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G046640 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS06G45040 OS02G07930 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS08G08120 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00038G01620 PP00022G00310 PP00364G00090 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00364G00090 PP00038G01620 PP00022G00310 ... | 4 | ||
Populus trichocarpa | Tree-based ortholog | 1-to-many | PT07G12110 PT17G03940 | 2 | |
Anchor point | 1-to-many | PT07G12110 PT17G03940 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT07G12110 PT17G03940 | 2 | ||
Prunus persica | Tree-based ortholog | 1-to-1 | PPE_003G00780 | 1 | |
Anchor point | 1-to-1 | PPE_003G20050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G20050 | 1 | ||
Ricinus communis | Tree-based ortholog | 1-to-1 | RC30156G00380 | 1 | |
Anchor point | 1-to-1 | RC30156G00380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30156G00380 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL07G052620 | 1 | |
Anchor point | 1-to-1 | SL07G052620 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL07G052620 | 1 | ||
Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST07G021210 | 1 | |
Anchor point | 1-to-1 | ST12G012030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST07G021210 | 1 | ||
Thellungiella parvula | Orthologous gene family | 1-to-1 | TP3G19860 | 1 | |
Tree-based ortholog | 1-to-1 | TP3G19860 | 1 | ||
Anchor point | 1-to-many | TP3G19860 TP7G13460 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G19860 | 1 | ||
Theobroma cacao | Tree-based ortholog | 1-to-many | TC0006G19720 TC0007G06400 TC0002G16110 | 3 | |
Anchor point | 1-to-1 | TC0002G15710 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G15710 | 1 | ||
Vitis vinifera | Tree-based ortholog | 1-to-many | VV19G03950 VV12G00290 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV19G03950 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-many | ZM09G16280 ZM06G12320 ZM05G20740 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G20740 | 1 |