Integrative Orthology Viewer: AT3G18350 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G48840 AT3G18350 AT5G23390 | 3 | |
Tree-based ortholog | AT1G48840 AT3G18350 | 2 | ||
Anchor point | AT1G48840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT3G18350 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00079G00490 ATR_00171G00360 | 2 | |
Tree-based ortholog | many-to-1 | ATR_00079G00490 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00079G00490 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G42540 AL3G19860 AL6G23200 | 3 | |
Tree-based ortholog | many-to-1 | AL1G42540 | 1 | ||
Anchor point | 1-to-many | AL1G42540 AL3G19860 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G19860 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV5G05390 BV9G11560 | 2 | |
Tree-based ortholog | many-to-1 | BV5G05390 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G05390 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G31160 BR05G18590 BR06G24940 | 3 | |
Tree-based ortholog | many-to-1 | BR05G18590 | 1 | ||
Anchor point | 1-to-1 | BR01G31160 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G31160 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G36010 CRU_003G17330 CRU_006G20520 | 3 | |
Tree-based ortholog | many-to-1 | CRU_001G36010 | 1 | ||
Anchor point | 1-to-many | CRU_003G17330 CRU_001G36010 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G17330 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00003G04950 | 1 | |
Tree-based ortholog | many-to-1 | CP00003G04950 | 1 | ||
Anchor point | 1-to-1 | CP00003G04950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00003G04950 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL01G14530 CL06G15330 | 2 | |
Tree-based ortholog | many-to-1 | CL06G15330 | 1 | ||
Anchor point | 1-to-1 | CL06G15330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G15330 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00008G00940 CS00090G00190 | 2 | |
Tree-based ortholog | many-to-1 | CS00090G00190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00090G00190 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00005G00220 CM00030G02430 | 2 | |
Tree-based ortholog | many-to-many | CM00030G02430 CM00005G00220 CM00012G01010 ... | 5 | ||
Anchor point | 1-to-1 | CM00030G02430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00030G02430 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G06310 EG0007G20390 EG0011G18450 | 3 | |
Tree-based ortholog | many-to-1 | EG0011G18450 | 1 | ||
Anchor point | 1-to-many | EG0011G18450 EG0002G06310 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G18450 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV4G23050 FV5G35930 | 2 | |
Tree-based ortholog | many-to-many | FV4G23050 FV1G22850 FV5G35930 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G35930 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM07G10300 GM09G31590 GM10G43510 ... | 4 | |
Tree-based ortholog | many-to-many | GM06G04151 GM01G29816 GM07G10300 ... | 4 | ||
Anchor point | 1-to-many | GM07G10300 GM09G31590 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM07G10300 GM09G31590 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR04G11210 GR06G06050 GR12G13650 | 3 | |
Tree-based ortholog | many-to-many | GR06G06050 GR04G11210 | 2 | ||
Anchor point | 1-to-1 | GR06G06050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR04G11210 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ5G040520 | 1 | |
Tree-based ortholog | many-to-many | LJ5G040520 LJ1G054880 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G040520 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD06G018170 MD13G000080 MD14G021310 | 3 | |
Tree-based ortholog | many-to-1 | MD15G035080 | 1 | ||
Anchor point | 1-to-many | MD06G018170 MD14G021310 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD06G018170 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME05875G02490 ME06673G00020 | 2 | |
Tree-based ortholog | many-to-1 | ME06673G00020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06673G00020 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G115260 MT6G084190 | 2 | |
Tree-based ortholog | many-to-1 | MT6G084190 | 1 | ||
Anchor point | 1-to-1 | MT6G084190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT6G084190 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G42530 OS04G58100 OS05G17990 ... | 4 | |
Tree-based ortholog | many-to-many | OS05G17990 OS10G03830 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS05G17990 OS10G03830 | 2 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00022G02140 PP00028G02110 PP00364G00220 | 3 | |
Tree-based ortholog | many-to-many | PP00364G00220 PP00028G02110 PP00097G00500 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00028G02110 PP00364G00220 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT08G00300 PT12G05580 PT15G04650 | 3 | |
Tree-based ortholog | many-to-1 | PT15G04650 | 1 | ||
Anchor point | 1-to-1 | PT12G05580 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT15G04650 PT12G05580 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G36020 PPE_005G22460 | 2 | |
Tree-based ortholog | many-to-1 | PPE_005G22460 | 1 | ||
Anchor point | 1-to-1 | PPE_005G22460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G22460 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29974G00120 RC30131G04240 | 2 | |
Tree-based ortholog | many-to-1 | RC29974G00120 | 1 | ||
Anchor point | 1-to-1 | RC29974G00120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29974G00120 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G050140 SL03G119400 | 2 | |
Tree-based ortholog | many-to-1 | SL03G119400 | 1 | ||
Anchor point | 1-to-many | SL03G119400 SL04G007290 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G119400 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST02G005770 ST03G032950 | 2 | |
Tree-based ortholog | many-to-1 | ST03G032950 | 1 | ||
Anchor point | 1-to-many | ST05G008180 ST03G032950 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G032950 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G35730 TP2G23780 TP3G16460 | 3 | |
Tree-based ortholog | many-to-1 | TP1G35730 | 1 | ||
Anchor point | 1-to-many | TP1G35730 TP3G16460 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G16460 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0002G14630 TC0003G03510 | 2 | |
Tree-based ortholog | many-to-1 | TC0003G03510 | 1 | ||
Anchor point | 1-to-1 | TC0003G03510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G03510 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV10G07410 VV17G06070 | 2 | |
Tree-based ortholog | many-to-1 | VV17G06070 | 1 | ||
Anchor point | 1-to-1 | VV17G06070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV17G06070 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G57290 ZM04G19590 ZM10G26450 | 3 | |
Tree-based ortholog | many-to-1 | ZM01G57290 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G57290 | 1 |