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Integrative Orthology Viewer:
AT3G17820
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G48470 AT1G66200 AT3G17820 ... | 6 |  |
| Tree-based ortholog | AT3G17820 | 1 | ||
| Anchor point | AT1G48470 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT3G17820 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00006G01140 ATR_00025G01100 ATR_00060G00520 ... | 4 | |
| Tree-based ortholog | 1-to-many | ATR_00006G01140 ATR_00060G00520 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00006G01140 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G42130 AL2G13170 AL3G19270 ... | 6 | |
| Tree-based ortholog | 1-to-1 | AL3G19270 | 1 | ||
| Anchor point | 1-to-many | AL3G19270 AL1G42130 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G19270 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV0G80720 BV9G10840 | 2 | |
| Tree-based ortholog | 1-to-1 | BV9G10840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV9G10840 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR00G09560 BR01G31680 BR02G08000 ... | 10 | |
| Tree-based ortholog | 1-to-many | BR05G25930 BR01G31680 BR03G35310 | 3 | ||
| Anchor point | 1-to-many | BR03G35310 BR01G31680 BR06G04200 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G25930 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G35640 CRU_002G11410 CRU_003G16760 ... | 6 | |
| Tree-based ortholog | 1-to-1 | CRU_003G16760 | 1 | ||
| Anchor point | 1-to-many | CRU_001G35640 CRU_003G16760 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G16760 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00003G03650 CP00016G00480 CP00298G00010 | 3 | |
| Tree-based ortholog | 1-to-1 | CP00298G00010 | 1 | ||
| Anchor point | 1-to-1 | CP00003G03650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00003G03650 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR02G10060 | 1 | |
| Tree-based ortholog | 1-to-many | CR02G10060 CR03G12780 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR02G10060 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL03G08520 CL05G06190 CL05G12680 ... | 4 | |
| Tree-based ortholog | 1-to-1 | CL09G04210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G08520 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00011G01860 CS00157G00420 CS00197G00240 | 3 | |
| Tree-based ortholog | 1-to-1 | CS00157G00420 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00197G00240 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00006G06810 CM00042G00420 CM00055G00590 ... | 4 | |
| Tree-based ortholog | 1-to-1 | CM00060G02490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00042G00420 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G09620 EG0006G23910 EG0007G19990 ... | 6 | |
| Tree-based ortholog | 1-to-1 | EG0007G19990 | 1 | ||
| Anchor point | 1-to-1 | EG0011G18970 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G23910 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV1G29100 FV3G37990 FV4G15890 ... | 5 | |
| Tree-based ortholog | 1-to-1 | FV4G23570 | 1 | ||
| Anchor point | 1-to-1 | FV5G16330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G29100 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM02G41120 GM07G11810 GM09G30370 ... | 8 | |
| Tree-based ortholog | 1-to-many | GM09G30370 GM07G11810 | 2 | ||
| Anchor point | 1-to-many | GM07G11810 GM09G30370 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM07G11810 GM09G30370 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR01G20330 GR02G01590 GR05G03580 ... | 7 | |
| Tree-based ortholog | 1-to-many | GR02G01590 GR12G13340 GR13G07060 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR01G20330 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ2G010560 LJ6G003380 LJ6G023100 | 3 | |
| Tree-based ortholog | 1-to-1 | LJ2G010560 | 1 | ||
| Anchor point | 1-to-1 | LJ2G010560 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G003380 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G289630 MD00G300110 | 2 | |
| Tree-based ortholog | 1-to-1 | MD00G300110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G300110 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME05019G00240 ME07520G00210 ME11714G00020 ... | 4 | |
| Tree-based ortholog | 1-to-1 | ME11714G00020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME12270G00110 ME07520G00210 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT2G021242 MT2G021255 MT3G065250 ... | 5 | |
| Tree-based ortholog | 1-to-1 | MT6G071070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT6G071070 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G50240 OS03G12290 OS03G50490 ... | 4 | |
| Tree-based ortholog | 1-to-1 | OS02G50240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G50240 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00019G01220 PP00019G01240 PP00345G00020 ... | 4 | |
| Tree-based ortholog | 1-to-1 | PP00044G00020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00345G00030 PP00019G01220 PP00019G01240 ... | 4 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT04G08540 PT05G09320 PT07G06960 ... | 8 | |
| Tree-based ortholog | 1-to-many | PT07G06960 PT05G09320 | 2 | ||
| Anchor point | 1-to-1 | PT12G04390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT12G04390 PT15G03470 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_001G14130 PPE_001G35510 PPE_003G14820 ... | 4 | |
| Tree-based ortholog | 1-to-1 | PPE_001G35510 | 1 | ||
| Anchor point | 1-to-1 | PPE_005G23700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G14820 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC29675G00050 RC29726G00330 | 2 | |
| Tree-based ortholog | 1-to-1 | RC29675G00050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29675G00050 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G080280 SL04G014510 SL05G051250 ... | 5 | |
| Tree-based ortholog | 1-to-1 | SL12G041870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL11G011380 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST01G022730 ST04G011590 ST05G023590 ... | 5 | |
| Tree-based ortholog | 1-to-1 | ST12G020920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST11G008040 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G35420 TP3G15940 TP5G21260 ... | 6 | |
| Tree-based ortholog | 1-to-1 | TP3G15940 | 1 | ||
| Anchor point | 1-to-many | TP3G15940 TP1G35420 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G15940 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0002G15490 TC0003G06220 TC0004G05350 ... | 4 | |
| Tree-based ortholog | 1-to-1 | TC0002G15490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G06220 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV01G08900 VV05G04000 VV07G04450 ... | 5 | |
| Tree-based ortholog | 1-to-1 | VV01G08900 | 1 | ||
| Anchor point | 1-to-1 | VV17G07610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G06270 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G08320 ZM01G50630 ZM04G24190 ... | 5 | |
| Tree-based ortholog | 1-to-many | ZM05G39540 ZM04G24190 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM05G39540 ZM04G24190 | 2 |