Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT3G17510
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G48260 AT3G17510 | 2 |  |
| Anchor point | AT1G48260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT3G17510 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00045G00920 | 1 | |
| Anchor point | 1-to-1 | ATR_00045G00920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00045G00920 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G41850 AL3G18850 | 2 | |
| Anchor point | 1-to-many | AL3G18850 AL1G41850 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G18850 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV0G09410 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G09410 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR03G35100 BR05G26210 BR08G04180 | 3 | |
| Anchor point | 1-to-many | BR06G04330 BR03G35100 BR08G04180 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G26210 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G35420 CRU_003G16450 | 2 | |
| Anchor point | 1-to-many | CRU_003G16450 CRU_001G35420 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G16450 | 1 | ||
| Carica papaya | Anchor point | 1-to-1 | CP00146G00220 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00146G00220 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR04G02380 | 1 | |
| Citrullus lanatus | Anchor point | 1-to-1 | CL05G07780 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G06320 | 1 | ||
| Citrus sinensis | Anchor point | 1-to-1 | CS00016G02320 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00016G02320 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00006G08690 CM00047G01030 | 2 | |
| Anchor point | 1-to-1 | CM00006G08690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00006G08690 | 1 | ||
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G33350 | 1 | |
| Fragaria vesca | Anchor point | 1-to-1 | FV4G18850 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G18850 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM13G17990 GM15G21340 GM17G04540 | 3 | |
| Anchor point | 1-to-many | GM13G17990 GM17G04540 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM13G17990 GM17G04540 | 2 | ||
| Gossypium raimondii | Anchor point | 1-to-1 | GR06G08160 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G08160 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G014280 | 1 | |
| Malus domestica | Orthologous gene family | many-to-1 | MD13G013360 | 1 | |
| Anchor point | 1-to-many | MD13G012110 MD13G013360 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD13G012110 | 1 | ||
| Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME08828G00140 | 1 | |
| Medicago truncatula | Orthologous gene family | many-to-1 | MT4G123940 | 1 | |
| Anchor point | 1-to-1 | MT4G123940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G045470 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G18800 OS05G04550 OS07G44290 | 3 | |
| Anchor point | 1-to-1 | OS05G04550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS05G04550 OS01G18800 | 2 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL06G03710 | 1 | |
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00058G00090 PP00186G00330 PP00030G00430 ... | 5 | |
| Populus trichocarpa | Anchor point | 1-to-1 | PT10G00250 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT10G00250 | 1 | ||
| Prunus persica | Anchor point | 1-to-1 | PPE_001G09930 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G09930 | 1 | ||
| Ricinus communis | Anchor point | 1-to-1 | RC29889G01640 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29889G01640 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL05G053210 SL12G098910 | 2 | |
| Anchor point | 1-to-1 | SL12G098910 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G053210 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST05G025880 ST12G030870 | 2 | |
| Anchor point | 1-to-1 | ST12G030870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G025880 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G35210 TP3G15670 | 2 | |
| Anchor point | 1-to-many | TP1G35210 TP6G41060 TP3G15670 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G15670 | 1 | ||
| Theobroma cacao | Anchor point | 1-to-1 | TC0004G31320 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G31320 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV05G02500 | 1 | |
| Anchor point | 1-to-1 | VV05G02500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV05G02500 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM02G39580 ZM03G10400 ZM10G11780 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G39580 | 1 |