Integrative Orthology Viewer: AT3G16980 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT3G16980 AT4G16265 | 2 | |
Tree-based ortholog | AT3G16980 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT3G16980 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00002G03950 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00002G03950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00002G03950 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL3G18250 AL7G27020 | 2 | |
Tree-based ortholog | 1-to-1 | AL3G18250 | 1 | ||
Anchor point | N/A | AL3G18250 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G18250 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV3G03820 | 1 | |
Anchor point | N/A | BV3G03820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G03820 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR00G05780 BR01G19770 | 2 | |
Tree-based ortholog | 1-to-many | BR01G19770 BR00G05780 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G19770 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_003G15950 CRU_007G24150 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_003G15950 | 1 | ||
Anchor point | N/A | CRU_003G15950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G15950 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00009G00820 | 1 | |
Tree-based ortholog | 1-to-1 | CP00009G00820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00009G00820 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR12G04410 | 1 | |
Tree-based ortholog | 1-to-1 | CR12G04410 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G04410 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL05G07260 | 1 | |
Tree-based ortholog | 1-to-1 | CL05G07260 | 1 | ||
Anchor point | N/A | CL05G07260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G07260 | 1 | ||
Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00001G04660 | 1 | |
Cucumis melo | Orthologous gene family | many-to-1 | CM00006G08130 | 1 | |
Tree-based ortholog | 1-to-1 | CM00006G08130 | 1 | ||
Anchor point | N/A | CM00006G08130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00006G08130 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0008G21600 | 1 | |
Tree-based ortholog | 1-to-many | EG0008G21650 EG0008G21600 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G21600 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV3G39630 | 1 | |
Tree-based ortholog | 1-to-1 | FV3G39630 | 1 | ||
Anchor point | N/A | FV3G39630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G39630 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM09G04220 GM15G15250 | 2 | |
Tree-based ortholog | 1-to-many | GM15G15250 GM09G04220 GM07G37010 | 3 | ||
Anchor point | N/A | GM15G15250 GM09G04220 GM07G37010 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM15G15250 GM09G04220 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR02G03000 | 1 | |
Tree-based ortholog | 1-to-1 | GR02G03000 | 1 | ||
Anchor point | N/A | GR02G03000 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR02G03000 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ4G038180 | 1 | |
Tree-based ortholog | 1-to-1 | LJ4G038180 | 1 | ||
Anchor point | N/A | LJ4G038180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G038180 | 1 | ||
Malus domestica | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD16G009890 MD13G014200 | 2 | |
Manihot esculenta | Orthologous gene family | many-to-1 | ME01551G04280 | 1 | |
Tree-based ortholog | 1-to-1 | ME01551G04280 | 1 | ||
Anchor point | N/A | ME01551G04280 ME01945G00210 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME01551G04280 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT2G034520 | 1 | |
Tree-based ortholog | 1-to-1 | MT2G034520 | 1 | ||
Anchor point | N/A | MT2G034520 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G034520 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS12G37370 | 1 | |
Tree-based ortholog | 1-to-many | OS12G37370 OS03G01230 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS12G37370 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-many | OL02G04390 OL02G04400 | 2 | |
Tree-based ortholog | 1-to-many | OL02G04400 OL02G04390 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OL02G04400 OL02G04390 | 2 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00328G00130 | 1 | |
Tree-based ortholog | 1-to-1 | PP00328G00130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00328G00130 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-1 | PT08G10690 | 1 | |
Tree-based ortholog | 1-to-1 | PT08G10690 | 1 | ||
Anchor point | N/A | PT10G14250 PT08G10690 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT08G10690 | 1 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_001G11430 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_001G11430 | 1 | ||
Anchor point | N/A | PPE_001G11430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G11430 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29889G00410 | 1 | |
Tree-based ortholog | 1-to-1 | RC29889G00410 | 1 | ||
Anchor point | N/A | RC29889G00410 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29889G00410 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL05G053430 | 1 | |
Tree-based ortholog | 1-to-1 | SL05G053430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G053430 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST05G026110 | 1 | |
Tree-based ortholog | 1-to-1 | ST05G026110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G026110 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP7G14780 | 1 | |
Tree-based ortholog | 1-to-1 | TP7G14780 | 1 | ||
Anchor point | N/A | TP7G14780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G14780 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0004G29810 | 1 | |
Tree-based ortholog | 1-to-1 | TC0004G29810 | 1 | ||
Anchor point | N/A | TC0004G29810 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G29810 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV05G11760 | 1 | |
Tree-based ortholog | 1-to-1 | VV05G11760 | 1 | ||
Anchor point | N/A | VV05G11760 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV05G11760 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM03G17360 | 1 | |
Tree-based ortholog | 1-to-1 | ZM04G08280 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G17360 | 1 |