Integrative Orthology Viewer: AT3G16950 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT3G16950 | 1 | |
Tree-based ortholog | AT3G16950 | 1 | ||
Anchor point | AT4G16155 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT3G16950 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00003G00150 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00003G00150 | 1 | ||
Arabidopsis lyrata | Tree-based ortholog | 1-to-1 | AL3G18220 | 1 | |
Anchor point | 1-to-many | AL7G27240 AL3G18220 AL3G18570 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G18220 | 1 | ||
Beta vulgaris | Tree-based ortholog | 1-to-1 | BV3G03780 | 1 | |
Anchor point | 1-to-1 | BV3G03780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G03780 | 1 | ||
Brassica rapa | Tree-based ortholog | 1-to-1 | BR03G34900 | 1 | |
Anchor point | 1-to-many | BR05G26360 BR01G19870 BR03G34900 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G34900 | 1 | ||
Capsella rubella | Tree-based ortholog | 1-to-1 | CRU_003G15920 | 1 | |
Anchor point | 1-to-many | CRU_003G15920 CRU_007G24280 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G15920 | 1 | ||
Carica papaya | Tree-based ortholog | 1-to-1 | CP00929G00040 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00929G00040 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR01G03740 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR01G03740 | 1 | ||
Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL06G04430 | 1 | |
Anchor point | 1-to-1 | CL06G04430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G04430 | 1 | ||
Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00016G01180 | 1 | |
Anchor point | 1-to-1 | CS00016G01180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00016G01180 | 1 | ||
Cucumis melo | Tree-based ortholog | 1-to-1 | CM00047G01490 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00047G01490 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0001G02710 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G02710 | 1 | ||
Fragaria vesca | Tree-based ortholog | 1-to-1 | FV3G39690 | 1 | |
Anchor point | 1-to-1 | FV3G39690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G39690 | 1 | ||
Glycine max | Tree-based ortholog | 1-to-many | GM09G04270 GM15G15310 GM17G03560 ... | 4 | |
Anchor point | 1-to-many | GM09G04270 GM15G15310 GM07G37050 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM07G37050 GM17G03560 | 2 | ||
Gossypium raimondii | Tree-based ortholog | 1-to-many | GR06G07910 GR06G25930 | 2 | |
Anchor point | 1-to-many | GR06G25930 GR06G07910 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G25930 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ5G019610 | 1 | |
Anchor point | 1-to-1 | LJ4G038240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G019610 | 1 | ||
Malus domestica | Tree-based ortholog | 1-to-1 | MD04G002360 | 1 | |
Anchor point | 1-to-many | MD16G009910 MD13G014230 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD16G009910 MD13G014230 | 2 | ||
Manihot esculenta | Tree-based ortholog | 1-to-many | ME01945G00250 ME01551G04240 | 2 | |
Anchor point | 1-to-many | ME01945G00250 ME01551G04240 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME01945G00250 ME01551G04240 | 2 | ||
Medicago truncatula | Tree-based ortholog | 1-to-many | MT2G034580 MT4G121880 | 2 | |
Anchor point | 1-to-many | MT2G034580 MT4G121880 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G121880 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS05G06460 OS01G23610 | 2 | |
Anchor point | 1-to-1 | OS05G06460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G23610 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL04G04680 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL04G04680 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00112G00700 PP00035G00560 PP00352G00270 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00352G00270 PP00035G00560 PP00112G00700 | 3 | ||
Populus trichocarpa | Tree-based ortholog | 1-to-many | PT08G10760 PT10G14210 | 2 | |
Anchor point | 1-to-many | PT08G10760 PT10G14210 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT08G10760 PT10G14210 | 2 | ||
Prunus persica | Tree-based ortholog | 1-to-1 | PPE_001G11470 | 1 | |
Anchor point | 1-to-1 | PPE_001G11470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G11470 | 1 | ||
Ricinus communis | Tree-based ortholog | 1-to-1 | RC29889G00370 | 1 | |
Anchor point | 1-to-1 | RC29889G00370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29889G00370 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL01G100360 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G100360 | 1 | ||
Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST01G038190 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G038190 | 1 | ||
Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP3G15190 | 1 | |
Anchor point | 1-to-many | TP3G15190 TP7G14660 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G15190 | 1 | ||
Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0004G29750 | 1 | |
Anchor point | 1-to-1 | TC0004G29750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G29750 | 1 | ||
Vitis vinifera | Tree-based ortholog | 1-to-many | VV14G09460 VV14G09390 | 2 | |
Anchor point | 1-to-1 | VV05G11800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV05G11800 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-many | ZM08G12120 ZM08G12100 ZM08G07990 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G07990 | 1 |