Integrative Orthology Viewer: AT3G13510 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G55360 AT2G44210 AT3G13510 ... | 4 | |
Tree-based ortholog | AT3G13510 | 1 | ||
Anchor point | AT5G56530 AT1G55360 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | AT3G13510 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00068G00250 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00068G00250 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00068G00250 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G49960 AL3G14050 AL4G31920 ... | 4 | |
Tree-based ortholog | 1-to-1 | AL3G14050 | 1 | ||
Anchor point | many-to-many | AL3G14050 AL1G49960 AL8G22100 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G14050 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV4G11300 | 1 | |
Tree-based ortholog | 1-to-1 | BV4G11300 | 1 | ||
Anchor point | many-to-1 | BV4G11300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G11300 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR03G21950 BR04G26450 BR05G04050 ... | 6 | |
Tree-based ortholog | 1-to-1 | BR05G29430 | 1 | ||
Anchor point | many-to-many | BR08G00590 BR05G29430 BR10G09780 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G29430 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G41770 CRU_003G12400 CRU_004G25820 ... | 4 | |
Tree-based ortholog | 1-to-1 | CRU_003G12400 | 1 | ||
Anchor point | many-to-many | CRU_008G16590 CRU_001G41770 CRU_003G12400 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G12400 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00228G00240 | 1 | |
Tree-based ortholog | 1-to-1 | CP01498G00010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00228G00240 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL02G24390 CL03G14250 CL09G03230 | 3 | |
Tree-based ortholog | 1-to-1 | CL02G24390 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G24390 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00123G00190 | 1 | |
Tree-based ortholog | 1-to-1 | CS00123G00190 | 1 | ||
Anchor point | many-to-1 | CS00123G00190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00123G00190 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00025G03760 CM00060G01430 | 2 | |
Tree-based ortholog | 1-to-1 | CM00022G05560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00022G05560 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G30060 EG0010G15280 | 2 | |
Tree-based ortholog | 1-to-many | EG0002G30060 EG0010G15280 | 2 | ||
Anchor point | many-to-many | EG0010G15280 EG0002G30060 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G15280 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV3G36030 | 1 | |
Tree-based ortholog | 1-to-1 | FV3G36030 | 1 | ||
Anchor point | many-to-1 | FV3G36030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G36030 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM05G30070 GM08G13210 GM08G17180 ... | 4 | |
Tree-based ortholog | 1-to-1 | GM08G13210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM05G30070 GM08G13210 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G24140 GR09G00010 | 2 | |
Tree-based ortholog | 1-to-1 | GR09G00010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G00010 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ1G073580 | 1 | |
Tree-based ortholog | 1-to-many | LJ1G073580 LJ5G023650 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G073580 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G011190 MD03G000770 MD11G000250 | 3 | |
Tree-based ortholog | 1-to-many | MD00G011190 MD11G000250 MD03G000770 | 3 | ||
Anchor point | many-to-many | MD03G000770 MD11G000250 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD03G000770 MD00G011190 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME01508G00030 ME05161G00040 ME06582G01150 | 3 | |
Tree-based ortholog | 1-to-many | ME05161G00040 ME06582G01150 | 2 | ||
Anchor point | many-to-1 | ME06582G01150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME05161G00040 ME06582G01150 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT2G062610 MT8G088510 | 2 | |
Tree-based ortholog | 1-to-1 | MT8G088510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G088510 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G59240 OS07G10530 OS07G38590 | 3 | |
Tree-based ortholog | 1-to-many | OS03G59240 OS07G10530 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G38590 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00117G00640 PP00293G00070 | 2 | |
Tree-based ortholog | 1-to-many | PP00117G00640 PP00293G00070 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00293G00070 PP00117G00640 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G00380 PT01G23300 PT03G22120 | 3 | |
Tree-based ortholog | 1-to-1 | PT01G00380 | 1 | ||
Anchor point | many-to-many | PT03G22120 PT01G00380 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT03G22120 PT01G00380 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_006G01570 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_006G01570 | 1 | ||
Anchor point | many-to-1 | PPE_006G01570 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G01570 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC28842G00440 RC29616G00010 | 2 | |
Tree-based ortholog | 1-to-1 | RC28842G00440 | 1 | ||
Anchor point | many-to-1 | RC28842G00440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28842G00440 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G005550 SL01G081570 | 2 | |
Tree-based ortholog | 1-to-1 | SL01G005550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G005550 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G005770 ST01G027540 | 2 | |
Tree-based ortholog | 1-to-1 | ST01G005770 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G005770 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G41040 TP3G11720 TP4G26290 ... | 4 | |
Tree-based ortholog | 1-to-1 | TP3G11720 | 1 | ||
Anchor point | many-to-many | TP1G41040 TP6G18320 TP3G11720 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G11720 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G13910 TC0009G16010 | 2 | |
Tree-based ortholog | 1-to-1 | TC0009G16010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G16010 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV06G07660 VV13G01520 | 2 | |
Tree-based ortholog | 1-to-1 | VV06G07660 | 1 | ||
Anchor point | many-to-1 | VV06G07660 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G07660 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G56850 ZM07G04360 ZM07G25030 | 3 | |
Tree-based ortholog | 1-to-many | ZM01G56850 ZM07G04360 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM07G25030 | 1 |