Integrative Orthology Viewer: AT3G13450 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G55510 AT3G13450 | 2 | |
Tree-based ortholog | AT3G13450 | 1 | ||
Anchor point | AT1G55510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT3G13450 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00004G00570 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00004G00570 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00004G00570 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G50080 AL3G14010 | 2 | |
Tree-based ortholog | 1-to-1 | AL3G14010 | 1 | ||
Anchor point | 1-to-many | AL1G50080 AL3G14010 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G14010 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV4G11250 | 1 | |
Tree-based ortholog | 1-to-1 | BV4G11250 | 1 | ||
Anchor point | 1-to-1 | BV4G11250 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G11250 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-1 | BR08G00500 | 1 | |
Tree-based ortholog | 1-to-1 | BR08G00500 | 1 | ||
Anchor point | 1-to-1 | BR08G00500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR08G00500 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_001G41900 | 1 | |
Tree-based ortholog | 1-to-1 | CRU_001G41900 | 1 | ||
Anchor point | 1-to-1 | CRU_001G41900 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G41900 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00119G00290 | 1 | |
Tree-based ortholog | 1-to-1 | CP00119G00290 | 1 | ||
Anchor point | 1-to-1 | CP00119G00290 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00119G00290 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR06G15740 | 1 | |
Tree-based ortholog | 1-to-1 | CR06G15740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G15740 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL03G14330 | 1 | |
Tree-based ortholog | 1-to-1 | CL03G14330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G14330 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00123G00330 | 1 | |
Tree-based ortholog | 1-to-1 | CS00123G00330 | 1 | ||
Anchor point | 1-to-1 | CS00123G00330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00123G00330 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00025G03650 | 1 | |
Tree-based ortholog | 1-to-1 | CM00025G03650 | 1 | ||
Anchor point | 1-to-1 | CM00025G03650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00025G03650 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0010G15170 | 1 | |
Tree-based ortholog | 1-to-1 | EG0010G15170 | 1 | ||
Anchor point | 1-to-1 | EG0010G15170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G15170 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV3G35940 | 1 | |
Tree-based ortholog | 1-to-1 | FV3G35940 | 1 | ||
Anchor point | 1-to-1 | FV3G35940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G35940 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G25010 GM03G17950 | 2 | |
Tree-based ortholog | 1-to-many | GM01G25010 GM03G17950 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM03G17950 GM01G25010 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR09G00100 | 1 | |
Tree-based ortholog | 1-to-1 | GR09G00100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G00100 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ4G039670 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G075770 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G019560 MD00G334550 MD03G000640 ... | 4 | |
Tree-based ortholog | 1-to-many | MD00G019560 MD03G000640 MD00G334550 ... | 4 | ||
Anchor point | 1-to-many | MD11G000170 MD03G000640 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G019560 MD00G334550 MD11G000170 ... | 4 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME06582G01010 | 1 | |
Tree-based ortholog | 1-to-1 | ME06582G01010 | 1 | ||
Anchor point | 1-to-1 | ME06582G01010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06582G01010 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT4G021470 | 1 | |
Tree-based ortholog | 1-to-1 | MT4G021470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G021470 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS07G07470 | 1 | |
Tree-based ortholog | 1-to-1 | OS07G07470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G07470 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL16G00540 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL06G02580 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00152G00240 | 1 | |
Tree-based ortholog | 1-to-1 | PP00152G00240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00152G00240 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-1 | PT03G22280 | 1 | |
Tree-based ortholog | 1-to-1 | PT03G22280 | 1 | ||
Anchor point | 1-to-1 | PT03G22280 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT03G22280 | 1 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_006G01670 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_006G01670 | 1 | ||
Anchor point | 1-to-1 | PPE_006G01670 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G01670 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC28842G00260 | 1 | |
Tree-based ortholog | 1-to-1 | RC28842G00260 | 1 | ||
Anchor point | 1-to-1 | RC28842G00260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28842G00260 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL01G028900 | 1 | |
Tree-based ortholog | 1-to-1 | SL01G028900 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G028900 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST01G015380 | 1 | |
Tree-based ortholog | 1-to-1 | ST01G015380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G015380 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G41120 TP3G11660 | 2 | |
Tree-based ortholog | 1-to-1 | TP3G11660 | 1 | ||
Anchor point | 1-to-many | TP3G11660 TP1G41120 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G41120 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0009G15840 | 1 | |
Tree-based ortholog | 1-to-1 | TC0009G15840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G15840 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV06G07870 | 1 | |
Tree-based ortholog | 1-to-1 | VV06G07870 | 1 | ||
Anchor point | 1-to-1 | VV06G07870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G07870 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM02G46520 | 1 | |
Tree-based ortholog | 1-to-1 | ZM02G46520 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G46520 | 1 |