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Integrative Orthology Viewer:
AT3G12780
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G56190 AT1G79550 AT3G12780 | 3 |  |
| Tree-based ortholog | AT3G12780 | 1 | ||
| Anchor point | AT1G56190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT3G12780 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00062G01910 ATR_00062G01980 | 2 | |
| Tree-based ortholog | 1-to-1 | ATR_00062G01910 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00062G01910 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G51070 AL2G28570 AL3G13230 | 3 | |
| Tree-based ortholog | 1-to-1 | AL3G13230 | 1 | ||
| Anchor point | 1-to-many | AL3G13230 AL1G51070 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G13230 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV2G00100 | 1 | |
| Tree-based ortholog | 1-to-1 | BV2G00190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G00190 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR00G00040 BR02G25400 BR03G33150 ... | 6 | |
| Tree-based ortholog | 1-to-many | BR05G30080 BR00G00040 BR03G33150 | 3 | ||
| Anchor point | 1-to-many | BR05G30060 BR03G33150 BR07G18460 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR00G00040 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_002G24980 CRU_003G11620 | 2 | |
| Tree-based ortholog | 1-to-1 | CRU_003G11620 | 1 | ||
| Anchor point | 1-to-many | CRU_002G24980 CRU_003G11620 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G11620 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00514G00030 CP02044G00010 | 2 | |
| Tree-based ortholog | 1-to-1 | CP02044G00010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP02044G00010 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR11G02430 | 1 | |
| Tree-based ortholog | 1-to-many | CR07G09880 CR11G02430 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR11G02430 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL02G18880 CL09G22970 | 2 | |
| Tree-based ortholog | 1-to-1 | CL02G18880 | 1 | ||
| Anchor point | 1-to-many | CL02G18880 CL09G22970 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G18880 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00052G00630 CS00052G00640 | 2 | |
| Tree-based ortholog | 1-to-1 | CS00052G00630 | 1 | ||
| Anchor point | 1-to-1 | CS00052G00630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00052G00630 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00017G01120 CM00039G00580 | 2 | |
| Tree-based ortholog | 1-to-1 | CM00039G00580 | 1 | ||
| Anchor point | 1-to-many | CM00017G01120 CM00039G00580 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00039G00580 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0006G11800 EG0006G38250 | 2 | |
| Tree-based ortholog | 1-to-1 | EG0006G11800 | 1 | ||
| Anchor point | 1-to-many | EG0006G11800 EG0006G38250 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G11800 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV7G03480 | 1 | |
| Tree-based ortholog | 1-to-1 | FV7G03470 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G03470 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM08G17600 GM15G41550 | 2 | |
| Tree-based ortholog | 1-to-many | GM08G17610 GM15G41540 | 2 | ||
| Anchor point | 1-to-many | GM08G17600 GM15G41540 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM08G17610 GM15G41540 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR02G10720 GR02G10730 | 2 | |
| Tree-based ortholog | 1-to-1 | GR02G10730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR02G10730 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ3G013990 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ3G014000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G014000 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G346720 MD05G010410 MD05G010460 ... | 4 | |
| Tree-based ortholog | 1-to-many | MD00G422230 MD05G010430 MD00G346720 ... | 5 | ||
| Anchor point | 1-to-1 | MD05G010410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD05G010430 MD10G017550 MD00G422230 ... | 4 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME02477G00340 ME02477G00350 ME03115G00280 | 3 | |
| Tree-based ortholog | 1-to-many | ME02477G00340 ME03115G00270 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME02477G00340 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT2G066120 MT2G066130 | 2 | |
| Tree-based ortholog | 1-to-1 | MT2G066110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G066110 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G58610 OS02G07260 OS06G45710 | 3 | |
| Tree-based ortholog | 1-to-many | OS01G58610 OS05G41640 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G41640 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL06G00630 | 1 | |
| Tree-based ortholog | 1-to-many | OL06G00630 OL02G05840 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL06G00630 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00056G00940 PP00201G00390 | 2 | |
| Tree-based ortholog | 1-to-many | PP00223G00120 PP00223G00070 PP00056G00940 ... | 9 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00056G00940 PP00223G00120 PP00201G00390 ... | 4 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT08G08440 PT08G08450 PT10G17150 ... | 4 | |
| Tree-based ortholog | 1-to-many | PT10G17150 PT08G08450 | 2 | ||
| Anchor point | 1-to-many | PT08G08440 PT10G17150 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G17150 PT08G08450 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_004G12730 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_004G12720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G12720 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30169G00680 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29950G00010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30169G00690 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL07G066600 SL07G066610 | 2 | |
| Tree-based ortholog | 1-to-1 | SL07G066610 | 1 | ||
| Anchor point | 1-to-1 | SL07G066600 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL07G066610 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST07G027100 ST07G027110 | 2 | |
| Tree-based ortholog | 1-to-1 | ST07G027100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST07G027100 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G41830 TP3G10950 TP5G34610 | 3 | |
| Tree-based ortholog | 1-to-1 | TP3G10950 | 1 | ||
| Anchor point | 1-to-many | TP5G34610 TP1G41830 TP3G10950 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G10950 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0007G17030 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0007G17020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0007G17020 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV19G09910 VV19G09920 | 2 | |
| Tree-based ortholog | 1-to-1 | VV19G09910 | 1 | ||
| Anchor point | 1-to-1 | VV19G09920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV19G09910 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM05G20350 ZM08G18700 | 2 | |
| Tree-based ortholog | 1-to-many | ZM06G27480 ZM08G18700 ZM03G29450 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM06G27480 ZM08G18700 | 2 |