Integrative Orthology Viewer: AT3G12440 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT3G12440 | 1 | |
Tree-based ortholog | AT3G12460 AT3G12430 AT3G12440 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | AT3G12440 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | many-to-1 | ATR_00003G02220 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00003G02220 | 1 | ||
Arabidopsis lyrata | Tree-based ortholog | many-to-1 | AL3G41780 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G12860 | 1 | ||
Beta vulgaris | Tree-based ortholog | many-to-1 | BV3G04430 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G04430 | 1 | ||
Brassica rapa | Tree-based ortholog | many-to-many | BR01G36590 BR01G36570 BR01G36580 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G36630 | 1 | ||
Capsella rubella | Tree-based ortholog | many-to-1 | CRU_003G11270 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G11270 | 1 | ||
Carica papaya | Tree-based ortholog | many-to-many | CP00009G00300 CP00516G00020 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CP00009G00300 CP00516G00020 | 2 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | many-to-1 | CR05G02490 | 1 | |
Citrullus lanatus | Tree-based ortholog | many-to-many | CL10G14390 CL10G14380 CL10G14370 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G14370 | 1 | ||
Citrus sinensis | Tree-based ortholog | many-to-1 | CS00091G00650 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00091G00650 | 1 | ||
Cucumis melo | Tree-based ortholog | many-to-1 | CM00011G06880 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00011G06880 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | many-to-many | EG0002G31500 EG0011G13950 EG0007G16260 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0004G20960 EG0003G31730 EG0004G20920 ... | 4 | ||
Fragaria vesca | Tree-based ortholog | many-to-1 | FV3G31280 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G31280 | 1 | ||
Glycine max | Tree-based ortholog | many-to-many | GM09G03870 GM15G14810 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM15G14810 GM09G03870 | 2 | ||
Gossypium raimondii | Tree-based ortholog | many-to-1 | GR05G06830 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR05G06830 | 1 | ||
Lotus japonicus | Tree-based ortholog | many-to-many | LJ6G011880 LJ3G037620 LJ1G038060 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G037620 | 1 | ||
Malus domestica | Tree-based ortholog | many-to-many | MD03G021480 MD00G230180 MD11G024840 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G373070 MD05G000170 MD00G143530 | 3 | ||
Manihot esculenta | Tree-based ortholog | many-to-many | ME01551G04580 ME00708G00320 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME00708G00320 ME01551G04580 | 2 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | many-to-many | OS07G02150 OS07G02170 OS07G02180 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS07G02150 OS07G02170 OS07G02180 | 3 | ||
Physcomitrella patens | Tree-based ortholog | many-to-many | PP00135G00240 PP00004G01380 | 2 | |
Populus trichocarpa | Tree-based ortholog | many-to-many | PT16G02870 PT06G03140 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT06G03140 PT16G02870 | 2 | ||
Prunus persica | Tree-based ortholog | many-to-many | PPE_007G01120 PPE_004G17170 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G01120 | 1 | ||
Ricinus communis | Tree-based ortholog | many-to-1 | RC30116G00170 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30116G00170 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | many-to-many | SL10G078200 SL12G094540 SL12G042390 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL08G078620 | 1 | ||
Solanum tuberosum | Tree-based ortholog | many-to-many | ST10G019620 ST12G027800 ST01G040410 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ST08G005300 ST01G011550 ST08G005290 | 3 | ||
Thellungiella parvula | Tree-based ortholog | many-to-1 | TP3G10600 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | TP3G10600 TP7G04890 | 2 | ||
Theobroma cacao | Tree-based ortholog | many-to-1 | TC0004G30440 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G30440 | 1 | ||
Vitis vinifera | Tree-based ortholog | many-to-1 | VV08G03870 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G03870 | 1 | ||
Zea mays | Tree-based ortholog | many-to-1 | ZM07G00460 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G07460 | 1 |