Integrative Orthology Viewer: AT3G07610 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G11950 AT1G62310 AT3G07610 ... | 4 | |
Tree-based ortholog | AT3G07610 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT3G07610 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00021G02290 ATR_00029G00520 ATR_00037G00790 ... | 5 | |
Tree-based ortholog | 1-to-many | ATR_00072G00470 ATR_00029G00530 ATR_00021G02290 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00029G00520 ATR_00037G00790 | 2 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G12290 AL1G26480 AL2G03200 ... | 6 | |
Tree-based ortholog | 1-to-1 | AL3G08060 | 1 | ||
Anchor point | N/A | AL3G08060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G08060 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV3G02000 BV5G01230 BV8G12640 ... | 6 | |
Tree-based ortholog | 1-to-many | BV9G11060 BV9G11070 BV9G11050 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BV9G11060 BV9G11070 | 2 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR00G05040 BR03G27820 BR03G27830 ... | 7 | |
Tree-based ortholog | 1-to-1 | BR05G33720 | 1 | ||
Anchor point | N/A | BR05G33720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G33720 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G11050 CRU_002G02580 CRU_003G06860 ... | 5 | |
Tree-based ortholog | 1-to-1 | CRU_003G06870 | 1 | ||
Anchor point | N/A | CRU_003G06860 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G11050 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00003G00920 CP00096G00280 CP00152G00480 ... | 4 | |
Tree-based ortholog | 1-to-1 | CP00707G00010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00707G00010 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR10G06340 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR10G06340 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL01G14760 CL05G00960 | 2 | |
Tree-based ortholog | 1-to-1 | CL01G14760 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G14760 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00007G03160 CS00127G00110 CS00157G00130 ... | 4 | |
Tree-based ortholog | 1-to-1 | CS00157G00130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00007G03160 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00006G00970 | 1 | |
Tree-based ortholog | 1-to-1 | CM00074G00080 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00074G00080 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0004G10890 EG0008G03680 EG0011G03390 | 3 | |
Tree-based ortholog | 1-to-1 | EG0008G03680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0004G10890 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G34430 FV3G01520 FV5G33290 ... | 6 | |
Tree-based ortholog | 1-to-many | FV5G33290 FV5G36720 FV7G17720 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | FV7G17720 FV0G34430 | 2 | ||
Glycine max | Orthologous gene family | many-to-many | GM07G39310 GM08G42515 GM08G48350 ... | 13 | |
Tree-based ortholog | 1-to-many | GM11G36240 GM11G36251 GM08G48350 ... | 10 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM10G43080 GM19G14700 GM19G12090 | 3 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR05G21130 GR06G08260 GR07G10910 ... | 6 | |
Tree-based ortholog | 1-to-many | GR05G21130 GR08G14810 GR13G06910 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR05G21130 GR08G14810 | 2 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G010740 LJ1G074440 LJ5G025330 ... | 5 | |
Tree-based ortholog | 1-to-many | LJ5G040190 LJ4G026270 LJ5G040210 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G021960 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD01G006800 MD01G021660 MD07G007500 ... | 4 | |
Tree-based ortholog | 1-to-1 | MD07G007490 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD06G001290 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME06598G00430 ME06916G01720 ME08485G00020 ... | 4 | |
Tree-based ortholog | 1-to-many | ME08485G00020 ME09876G00880 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06598G00430 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT00G24990 MT1G008060 MT1G083120 ... | 9 | |
Tree-based ortholog | 1-to-many | MT5G047620 MT00G24990 MT1G114150 ... | 8 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT1G069565 MT1G114130 MT1G114150 | 3 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G01940 OS02G58210 OS03G31594 | 3 | |
Tree-based ortholog | 1-to-many | OS02G01940 OS02G58210 OS03G31594 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS03G31594 OS02G58210 | 2 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00026G00660 PP00144G00100 PP00430G00100 ... | 4 | |
Tree-based ortholog | 1-to-many | PP00026G00660 PP00444G00120 PP00144G00100 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00430G00100 PP00026G00660 PP00144G00100 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT00G02490 PT04G00620 PT05G08290 ... | 6 | |
Tree-based ortholog | 1-to-many | PT05G09120 PT05G08290 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT05G09120 PT05G08290 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_002G12720 PPE_002G18310 PPE_002G29690 ... | 4 | |
Tree-based ortholog | 1-to-many | PPE_002G12720 PPE_005G01590 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G01490 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC30024G00210 RC30110G00010 | 2 | |
Tree-based ortholog | 1-to-1 | RC30110G00010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29842G00410 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G081010 SL02G082400 SL03G083240 ... | 5 | |
Tree-based ortholog | 1-to-1 | SL08G065830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G081010 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST02G024130 ST02G025760 ST03G013210 ... | 7 | |
Tree-based ortholog | 1-to-many | ST09G027840 ST09G027830 ST09G027810 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G016780 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G10640 TP2G02310 TP3G06550 ... | 4 | |
Tree-based ortholog | 1-to-1 | TP3G06550 | 1 | ||
Anchor point | N/A | TP3G06550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G06550 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G33900 TC0002G15210 TC0003G19950 ... | 6 | |
Tree-based ortholog | 1-to-many | TC0002G15210 TC0007G17440 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | TC0002G15210 TC0007G17440 | 2 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV15G06800 VV16G09040 | 2 | |
Tree-based ortholog | 1-to-1 | VV10G06840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV10G06840 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM04G24530 ZM04G41530 ZM07G13320 | 3 | |
Tree-based ortholog | 1-to-many | ZM04G41530 ZM04G24530 ZM01G45930 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G45930 | 1 |