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Integrative Orthology Viewer:
AT3G05420
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT3G05420 AT5G27630 | 2 |  |
| Tree-based ortholog | AT3G05420 | 1 | ||
| Anchor point | AT5G27630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT3G05420 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00057G02470 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00057G02470 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00057G02470 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL3G05300 AL6G27640 | 2 | |
| Tree-based ortholog | 1-to-1 | AL3G05300 | 1 | ||
| Anchor point | 1-to-many | AL6G27640 AL3G05300 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G05300 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV4G03850 | 1 | |
| Tree-based ortholog | 1-to-1 | BV4G03850 | 1 | ||
| Anchor point | 1-to-1 | BV4G03850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G03850 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR00G04220 BR02G36010 BR03G29930 ... | 4 | |
| Tree-based ortholog | 1-to-many | BR03G29930 BR00G04220 BR05G34930 | 3 | ||
| Anchor point | 1-to-many | BR05G34930 BR02G36010 BR03G29930 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G34930 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_003G04520 CRU_006G24200 | 2 | |
| Tree-based ortholog | 1-to-1 | CRU_003G04520 | 1 | ||
| Anchor point | 1-to-many | CRU_006G24200 CRU_003G04520 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G04520 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00048G00760 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00048G00760 | 1 | ||
| Anchor point | 1-to-1 | CP00048G00760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00048G00760 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR02G00370 | 1 | |
| Tree-based ortholog | 1-to-many | CR14G01060 CR07G01830 CR01G03050 ... | 8 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR02G00370 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL02G15790 | 1 | |
| Tree-based ortholog | 1-to-1 | CL02G15790 | 1 | ||
| Anchor point | 1-to-1 | CL02G15790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G15790 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00103G00310 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00103G00310 | 1 | ||
| Anchor point | 1-to-1 | CS00103G00310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00103G00310 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00003G03520 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00003G03520 | 1 | ||
| Anchor point | 1-to-1 | CM00003G03520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00003G03520 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G15340 EG0614G00010 | 2 | |
| Tree-based ortholog | 1-to-many | EG0614G00010 EG0002G15340 | 2 | ||
| Anchor point | 1-to-1 | EG0002G15340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G15340 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV6G05280 | 1 | |
| Tree-based ortholog | 1-to-1 | FV6G05280 | 1 | ||
| Anchor point | 1-to-1 | FV6G05280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G05280 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM03G39640 GM19G42270 GM20G37940 | 3 | |
| Tree-based ortholog | 1-to-many | GM03G39640 GM19G42270 GM20G37940 | 3 | ||
| Anchor point | 1-to-many | GM10G29340 GM19G42270 GM03G39640 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM20G37940 | 1 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR07G29880 GR07G34200 GR13G12510 ... | 4 | |
| Tree-based ortholog | 1-to-many | GR13G20530 GR13G12510 GR07G34200 ... | 4 | ||
| Anchor point | 1-to-many | GR13G20530 GR07G34200 GR07G29880 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G29880 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ5G029370 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ5G029370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G029370 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD04G016540 MD12G021990 | 2 | |
| Tree-based ortholog | 1-to-many | MD12G021990 MD04G016540 | 2 | ||
| Anchor point | 1-to-many | MD04G016540 MD12G021990 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD04G016540 MD12G021990 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME03614G04910 ME11110G00080 | 2 | |
| Tree-based ortholog | 1-to-many | ME03614G04910 ME11110G00080 | 2 | ||
| Anchor point | 1-to-many | ME11110G00080 ME03614G04910 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03614G04910 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT7G113200 | 1 | |
| Tree-based ortholog | 1-to-1 | MT7G113200 | 1 | ||
| Anchor point | 1-to-1 | MT7G113200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G113200 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS03G61930 | 1 | |
| Tree-based ortholog | 1-to-1 | OS03G61930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G61930 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL15G02390 | 1 | |
| Tree-based ortholog | 1-to-1 | OL15G02390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL15G02390 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00048G00320 PP00068G00230 | 2 | |
| Tree-based ortholog | 1-to-many | PP00048G00320 PP00068G00230 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00048G00320 PP00068G00230 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT05G02690 PT13G01880 | 2 | |
| Tree-based ortholog | 1-to-many | PT13G01880 PT05G02690 | 2 | ||
| Anchor point | 1-to-many | PT13G01880 PT05G02690 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT13G01880 PT05G02690 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_006G32820 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_006G32820 | 1 | ||
| Anchor point | 1-to-1 | PPE_006G32820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G32820 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30128G02000 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30128G02000 | 1 | ||
| Anchor point | 1-to-1 | RC30128G02000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30128G02000 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL01G099350 | 1 | |
| Tree-based ortholog | 1-to-1 | SL01G099350 | 1 | ||
| Anchor point | 1-to-1 | SL01G099350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G099350 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST01G037180 | 1 | |
| Tree-based ortholog | 1-to-1 | ST01G037180 | 1 | ||
| Anchor point | 1-to-1 | ST01G037180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G037180 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP2G20800 TP3G04280 | 2 | |
| Tree-based ortholog | 1-to-1 | TP3G04280 | 1 | ||
| Anchor point | 1-to-many | TP3G04280 TP2G20800 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G04280 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0005G30870 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0005G30870 | 1 | ||
| Anchor point | 1-to-1 | TC0005G30870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G30870 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV14G08600 | 1 | |
| Tree-based ortholog | 1-to-1 | VV14G08600 | 1 | ||
| Anchor point | 1-to-1 | VV14G08600 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G08600 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G58820 ZM09G13160 | 2 | |
| Tree-based ortholog | 1-to-many | ZM01G58820 ZM09G13160 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G58820 | 1 |