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Integrative Orthology Viewer:
AT3G04940
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT3G04940 | 1 |  |
| Tree-based ortholog | AT3G04940 | 1 | ||
| Anchor point | AT5G28020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT3G04940 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-many | ATR_00004G00380 ATR_00004G00370 ATR_00004G00390 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00004G00370 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-many | AL3G04700 AL6G28550 AL6G28570 ... | 4 | |
| Tree-based ortholog | 1-to-1 | AL3G04700 | 1 | ||
| Anchor point | 1-to-many | AL6G28550 AL3G04700 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G04700 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV4G05100 | 1 | |
| Anchor point | 1-to-1 | BV4G05090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G05090 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR09G05180 | 1 | |
| Tree-based ortholog | 1-to-1 | BR03G29770 | 1 | ||
| Anchor point | 1-to-many | BR00G08870 BR09G05170 BR03G29770 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR03G29770 BR02G35780 | 2 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_003G03980 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_003G03980 | 1 | ||
| Anchor point | 1-to-many | CRU_003G03980 CRU_006G24740 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G03980 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-many | CP00117G00600 CP00117G00590 | 2 | |
| Anchor point | 1-to-1 | CP00117G00590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00009G03680 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR16G04890 CR08G02820 CR16G08150 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR16G08150 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL03G15910 | 1 | |
| Tree-based ortholog | 1-to-many | CL03G15900 CL03G15910 CL03G15930 ... | 4 | ||
| Anchor point | 1-to-1 | CL02G16640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G15910 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00144G00120 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00144G00090 | 1 | ||
| Anchor point | 1-to-1 | CS00144G00070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00144G00120 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00025G01890 | 1 | |
| Tree-based ortholog | 1-to-many | CM00025G01900 CM00025G01890 CM00025G01870 | 3 | ||
| Anchor point | 1-to-1 | CM00003G04790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00003G04790 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0008G35560 | 1 | |
| Anchor point | 1-to-many | EG0008G35540 EG0002G13900 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G28070 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-many | FV0G24530 FV0G24540 | 2 | |
| Tree-based ortholog | 1-to-1 | FV0G24630 | 1 | ||
| Anchor point | 1-to-1 | FV0G24530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | FV0G24530 FV0G24540 | 2 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM10G30140 GM20G37280 | 2 | |
| Tree-based ortholog | 1-to-many | GM15G41600 GM08G17555 GM10G30130 ... | 6 | ||
| Anchor point | 1-to-many | GM19G43150 GM03G40490 GM10G30130 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM10G30140 GM20G37280 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR13G20200 GR13G20210 | 2 | |
| Tree-based ortholog | 1-to-many | GR13G20210 GR13G20200 | 2 | ||
| Anchor point | 1-to-many | GR04G24550 GR13G20200 GR13G12200 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR13G20200 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-many | LJ3G013760 LJ5G024410 LJ5G024570 | 3 | |
| Anchor point | 1-to-many | LJ1G072980 LJ5G024410 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G013760 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-1 | MD00G234820 | 1 | |
| Tree-based ortholog | 1-to-1 | MD00G459990 | 1 | ||
| Anchor point | 1-to-many | MD04G017810 MD12G023590 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD12G023590 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME03802G01040 | 1 | |
| Tree-based ortholog | 1-to-many | ME03802G01050 ME03802G01040 ME03614G03780 | 3 | ||
| Anchor point | 1-to-many | ME03614G03770 ME03802G01030 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03802G01040 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-many | MT1G081620 MT1G081625 | 2 | |
| Tree-based ortholog | 1-to-many | MT1G081640 MT1G081620 MT1G081625 | 3 | ||
| Anchor point | 1-to-1 | MT1G081610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G081620 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS12G42980 OS03G53650 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G74650 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-many | OL06G04490 OL02G01410 OL05G03160 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL12G03110 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00186G00210 PP00359G00260 PP00105G00480 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00071G00550 PP00017G00300 | 2 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT00G10000 PT00G10010 PT05G04810 | 3 | |
| Tree-based ortholog | 1-to-many | PT05G04820 PT05G04810 PT00G10000 ... | 5 | ||
| Anchor point | 1-to-many | PT13G03520 PT05G04810 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT00G10010 PT05G04810 PT00G10000 | 3 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_006G34240 | 1 | |
| Anchor point | 1-to-1 | PPE_006G34240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G34250 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-many | RC30128G00440 RC30128G00450 | 2 | |
| Tree-based ortholog | 1-to-many | RC30128G00430 RC30128G00420 RC30128G00440 ... | 5 | ||
| Anchor point | 1-to-1 | RC30128G00410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30128G00450 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL01G097920 | 1 | |
| Tree-based ortholog | 1-to-many | SL01G097930 SL01G097940 SL01G097950 ... | 4 | ||
| Anchor point | 1-to-1 | SL01G097920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G082060 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-many | ST01G035420 ST01G035430 ST01G035440 ... | 4 | |
| Tree-based ortholog | 1-to-many | ST01G035480 ST01G035470 ST01G035450 ... | 8 | ||
| Anchor point | 1-to-1 | ST01G035420 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G024030 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-many | TP2G20300 TP2G20310 | 2 | |
| Tree-based ortholog | 1-to-1 | TP3G03760 | 1 | ||
| Anchor point | 1-to-many | TP2G20300 TP3G03760 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G03760 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0005G28910 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0005G28910 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G28910 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-many | VV14G03670 VV14G03690 VV14G03710 ... | 5 | |
| Tree-based ortholog | 1-to-many | VV14G03710 VV14G03720 VV14G03750 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G03640 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM01G30000 ZM02G15550 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM03G07970 ZM08G01570 | 2 |