Integrative Orthology Viewer: AT3G04350 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G04090 AT3G04350 AT5G18490 ... | 4 | |
Tree-based ortholog | AT3G04350 | 1 | ||
Anchor point | AT5G18490 AT1G04090 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | AT3G04350 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00039G01090 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00039G01090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00039G01090 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G03420 AL3G03930 AL6G18540 ... | 4 | |
Tree-based ortholog | 1-to-1 | AL3G03930 | 1 | ||
Anchor point | many-to-many | AL3G03930 AL6G18540 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G03930 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV2G05880 | 1 | |
Tree-based ortholog | 1-to-1 | BV4G06660 | 1 | ||
Anchor point | many-to-1 | BV4G06660 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G06660 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-1 | BR00G07080 | 1 | |
Tree-based ortholog | 1-to-1 | BR01G40860 | 1 | ||
Anchor point | many-to-many | BR01G40860 BR10G16190 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G40860 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G03000 CRU_003G03390 CRU_006G16350 ... | 4 | |
Tree-based ortholog | 1-to-1 | CRU_003G03390 | 1 | ||
Anchor point | many-to-many | CRU_001G03000 CRU_003G03390 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G03390 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP01155G00010 | 1 | |
Tree-based ortholog | 1-to-1 | CP01155G00010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP01155G00010 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR10G04420 | 1 | |
Tree-based ortholog | 1-to-1 | CR10G04420 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR10G04420 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL03G09480 CL06G01450 | 2 | |
Tree-based ortholog | 1-to-1 | CL03G09480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G09480 | 1 | ||
Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00151G00380 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00151G00380 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00012G01500 CM00052G01730 | 2 | |
Tree-based ortholog | 1-to-1 | CM00012G01500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00012G01500 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0004G18230 EG0005G02240 EG0008G34210 ... | 5 | |
Tree-based ortholog | 1-to-1 | EG0008G34210 | 1 | ||
Anchor point | many-to-many | EG0008G34210 EG0011G11960 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G34210 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G26840 FV2G10190 FV6G20760 | 3 | |
Tree-based ortholog | 1-to-1 | FV0G26840 | 1 | ||
Anchor point | many-to-1 | FV0G26840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G26840 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM08G17410 GM15G41700 GM15G42160 ... | 4 | |
Tree-based ortholog | 1-to-many | GM19G43650 GM03G41000 GM10G30800 ... | 4 | ||
Anchor point | many-to-many | GM03G41000 GM10G30800 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM20G37110 GM10G30800 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR04G05750 GR07G14990 GR07G27400 ... | 4 | |
Tree-based ortholog | 1-to-many | GR13G18820 GR07G27400 | 2 | ||
Anchor point | many-to-many | GR13G18820 GR07G27400 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G27400 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ2G037630 | 1 | |
Tree-based ortholog | 1-to-1 | LJ2G037630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G037630 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G209550 MD00G213750 MD04G018970 ... | 5 | |
Tree-based ortholog | 1-to-many | MD12G024480 MD04G018970 MD00G233250 | 3 | ||
Anchor point | many-to-1 | MD04G018970 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD12G024480 MD04G018970 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME01508G00050 ME11106G00010 | 2 | |
Tree-based ortholog | 1-to-many | ME03614G02850 ME03802G00030 | 2 | ||
Anchor point | many-to-many | ME03802G00030 ME03614G02850 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME03802G00030 ME03614G02850 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G080370 MT1G080410 MT4G077620 ... | 4 | |
Tree-based ortholog | 1-to-many | MT1G080410 MT1G080370 | 2 | ||
Anchor point | many-to-1 | MT1G080370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT1G080410 MT1G080370 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G04930 OS03G51150 | 2 | |
Tree-based ortholog | 1-to-1 | OS03G04930 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G04930 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00199G00790 PP00318G00130 | 2 | |
Tree-based ortholog | 1-to-many | PP00318G00130 PP00199G00790 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00199G00790 PP00318G00130 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G23190 PT01G23250 PT09G02510 ... | 5 | |
Tree-based ortholog | 1-to-1 | PT13G04830 | 1 | ||
Anchor point | many-to-1 | PT13G04830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT13G04830 | 1 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_002G08190 PPE_006G35510 PPE_008G22770 ... | 4 | |
Tree-based ortholog | 1-to-1 | PPE_006G35510 | 1 | ||
Anchor point | many-to-1 | PPE_006G35510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G35510 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29637G00140 RC29680G00560 RC30115G00270 | 3 | |
Tree-based ortholog | 1-to-1 | RC29680G00560 | 1 | ||
Anchor point | many-to-many | RC29637G00140 RC29680G00560 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29680G00560 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL04G050140 SL05G055910 | 2 | |
Tree-based ortholog | 1-to-many | SL05G055910 SL04G050140 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G050140 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G027500 ST04G019080 ST05G029100 ... | 6 | |
Tree-based ortholog | 1-to-many | ST05G029100 ST04G019080 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G019080 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G02910 TP2G08770 TP3G03250 ... | 4 | |
Tree-based ortholog | 1-to-1 | TP3G03250 | 1 | ||
Anchor point | many-to-many | TP1G02910 TP3G03250 TP6G25830 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G03250 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G24860 TC0005G26670 TC0007G17060 | 3 | |
Tree-based ortholog | 1-to-1 | TC0005G26670 | 1 | ||
Anchor point | many-to-1 | TC0005G26670 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G26670 | 1 | ||
Vitis vinifera | Tree-based ortholog | 1-to-1 | VV14G05040 | 1 | |
Anchor point | many-to-1 | VV14G05040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV07G11690 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G03240 ZM05G05230 | 2 | |
Tree-based ortholog | 1-to-1 | ZM01G03240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G03240 | 1 |