Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT3G02680
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT3G02680 | 1 |  |
| Tree-based ortholog | AT3G02680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT3G02680 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00029G00370 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00029G00370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00029G00370 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL3G01870 | 1 | |
| Tree-based ortholog | 1-to-1 | AL3G01870 | 1 | ||
| Anchor point | N/A | AL3G01870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G01870 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV6G24220 | 1 | |
| Tree-based ortholog | 1-to-1 | BV6G24220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G24220 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR05G35510 | 1 | |
| Tree-based ortholog | 1-to-1 | BR05G35510 | 1 | ||
| Anchor point | N/A | BR05G35510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G35510 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_003G01680 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_003G01680 | 1 | ||
| Anchor point | N/A | CRU_003G01680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G01680 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL05G12590 | 1 | |
| Tree-based ortholog | 1-to-1 | CL05G12590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G12590 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00036G01020 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00036G01020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00036G01020 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00042G00610 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00042G00610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00042G00610 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0002G31810 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0002G31810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G31810 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-many | FV6G45810 FV6G45820 | 2 | |
| Tree-based ortholog | 1-to-1 | FV6G45820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G45810 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM02G40590 GM14G38900 | 2 | |
| Tree-based ortholog | 1-to-many | GM14G38900 GM02G40590 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM02G40590 GM14G38900 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR08G05480 | 1 | |
| Tree-based ortholog | 1-to-1 | GR08G05480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR08G05480 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-1 | MD07G013850 | 1 | |
| Tree-based ortholog | 1-to-1 | MD07G013850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD07G013850 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME07520G00820 | 1 | |
| Tree-based ortholog | 1-to-1 | ME07520G00820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07520G00820 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT5G076180 | 1 | |
| Tree-based ortholog | 1-to-1 | MT5G076180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G076180 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS10G34580 | 1 | |
| Tree-based ortholog | 1-to-1 | OS10G34580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS10G34580 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-1 | PP00219G00270 | 1 | |
| Tree-based ortholog | 1-to-1 | PP00219G00270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00219G00270 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT15G14830 | 1 | |
| Tree-based ortholog | 1-to-1 | PT15G14830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT15G14830 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_008G27990 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_008G27990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G27990 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29636G00040 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29636G00040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29636G00040 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL02G081520 | 1 | |
| Tree-based ortholog | 1-to-1 | SL02G081520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G081520 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST02G024840 | 1 | |
| Tree-based ortholog | 1-to-1 | ST02G024840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G024840 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP3G01710 | 1 | |
| Tree-based ortholog | 1-to-1 | TP3G01710 | 1 | ||
| Anchor point | N/A | TP3G01710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G01710 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0004G05610 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0004G05610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G05610 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV04G06760 | 1 | |
| Tree-based ortholog | 1-to-1 | VV04G06760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV04G06760 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM05G09730 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM05G09730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G09730 | 1 |