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Integrative Orthology Viewer:
AT3G02140
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT3G02140 | 1 |  |
| Tree-based ortholog | AT3G02140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT3G02140 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-many | ATR_00013G02420 ATR_00154G00350 | 2 | |
| Anchor point | N/A | ATR_00154G00350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00154G00350 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | 1-to-1 | AL3G01220 | 1 | |
| Anchor point | N/A | AL3G01220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G01220 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-many | BV0G35010 BV6G14240 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G14240 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR05G35800 | 1 | |
| Tree-based ortholog | 1-to-many | BR05G35800 BR03G28780 | 2 | ||
| Anchor point | N/A | BR05G35800 BR03G28780 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G35800 | 1 | ||
| Capsella rubella | Tree-based ortholog | 1-to-1 | CRU_003G01190 | 1 | |
| Anchor point | N/A | CRU_003G01190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G01190 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00014G01830 | 1 | |
| Anchor point | N/A | CP00014G01830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00014G01830 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-many | CL04G11550 CL07G00220 CL05G24690 | 3 | |
| Anchor point | N/A | CL04G11550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G24690 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00015G02600 | 1 | |
| Anchor point | N/A | CS00015G02600 CS00030G01030 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00015G02600 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-many | CM00001G01230 CM00016G04860 | 2 | |
| Anchor point | N/A | CM00001G01230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00016G04860 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0008G06600 EG0002G25800 EG0007G18780 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G18780 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV6G42490 | 1 | |
| Anchor point | N/A | FV6G42490 FV5G11970 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G03980 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM08G27010 GM18G50240 | 2 | |
| Anchor point | N/A | GM06G22210 GM08G27010 GM18G50240 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM08G27010 GM18G50240 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-1 | GR06G01000 | 1 | |
| Anchor point | N/A | GR13G09460 GR06G01000 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR13G09460 GR08G17670 | 2 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ1G038490 | 1 | |
| Anchor point | N/A | LJ4G029920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G038490 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD00G487130 MD10G011750 MD16G002990 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G040220 MD00G112900 MD16G002990 ... | 4 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-1 | ME04043G02070 | 1 | |
| Anchor point | N/A | ME04043G02070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME00109G00300 ME04489G00090 | 2 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-1 | MT7G013820 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G045370 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS03G11550 OS03G30570 OS07G41160 | 3 | |
| Anchor point | N/A | OS03G30570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G41160 | 1 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT04G12060 PT17G09450 | 2 | |
| Anchor point | N/A | PT17G09450 PT04G12060 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT08G09650 PT10G15790 | 2 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_003G23400 | 1 | |
| Anchor point | N/A | PPE_003G23400 PPE_005G20930 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G29950 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC29905G00090 | 1 | |
| Anchor point | N/A | RC30138G01360 RC29905G00090 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29905G00090 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL02G088910 SL02G030620 SL02G030630 ... | 14 | |
| Anchor point | N/A | SL02G066850 SL04G005380 SL02G088910 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G088910 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-many | ST02G033950 ST02G012700 ST02G012710 ... | 4 | |
| Anchor point | N/A | ST02G012700 ST02G033950 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G033950 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP3G01210 | 1 | |
| Anchor point | N/A | TP3G01210 TP5G24320 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G01210 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0004G10080 | 1 | |
| Anchor point | N/A | TC0004G10080 TC0003G10610 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G10080 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-many | VV17G04580 VV00G08170 VV01G10510 | 3 | |
| Anchor point | N/A | VV17G04580 VV01G10510 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G13050 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM09G25910 ZM01G18240 ZM09G19640 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM09G19640 ZM01G18240 | 2 |