Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT2G46790
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT2G46790 | 1 |  |
| Tree-based ortholog | AT2G46790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT2G46790 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00001G04830 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00023G01600 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | 1-to-1 | AL4G34960 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G34960 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV1G04160 | 1 | |
| Tree-based ortholog | 1-to-1 | BV3G17150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV1G04160 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR05G00990 | 1 | |
| Tree-based ortholog | 1-to-1 | BR05G00990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR04G27840 | 1 | ||
| Capsella rubella | Tree-based ortholog | 1-to-1 | CRU_004G28410 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G28410 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00193G00150 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00193G00150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00193G00150 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR16G11560 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR02G04720 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL00G07130 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL00G07130 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00001G05090 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00001G05090 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00005G09060 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00005G09060 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0001G11370 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G11370 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-many | FV7G34830 FV7G04240 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G04240 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM03G42221 GM19G44970 GM07G05530 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM06G14150 GM04G40640 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR07G11300 | 1 | |
| Tree-based ortholog | 1-to-1 | GR07G11300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G11300 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ1G075070 | 1 | |
| Tree-based ortholog | 1-to-many | LJ1G075070 LJ3G035070 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G075070 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD00G366420 MD16G010530 | 2 | |
| Tree-based ortholog | 1-to-many | MD07G020690 MD00G264810 MD00G366420 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G366420 MD16G010530 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME03581G00150 ME07571G00120 | 2 | |
| Tree-based ortholog | 1-to-many | ME07571G00120 ME03581G00150 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME03581G00150 ME07571G00120 | 2 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT7G118260 | 1 | |
| Tree-based ortholog | 1-to-many | MT7G118260 MT8G024260 MT3G092780 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G092780 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS09G36220 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS09G36220 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-many | OL13G01710 OL21G01270 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL10G03420 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-1 | PP00081G00620 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00412G00120 PP00412G00180 PP00081G00680 ... | 4 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT02G17980 PT14G10600 | 2 | |
| Tree-based ortholog | 1-to-many | PT02G17980 PT14G10600 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT02G17980 PT14G10600 | 2 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_002G30510 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G30510 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30076G00140 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30076G00140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30076G00140 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL10G005030 | 1 | |
| Tree-based ortholog | 1-to-1 | SL10G005030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G081240 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST10G006620 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G006620 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP4G28820 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G28820 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0001G33120 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G33120 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-many | VV15G07480 VV16G09830 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV16G09830 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM07G20370 ZM02G34100 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM07G20370 ZM02G34100 | 2 |