Integrative Orthology Viewer: AT2G45140 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT2G45140 AT3G60600 | 2 | |
Tree-based ortholog | AT2G45140 | 1 | ||
Anchor point | AT3G60600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT2G45140 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00106G00550 | 1 | |
Tree-based ortholog | 1-to-many | ATR_00086G00970 ATR_00106G00550 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00106G00550 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL4G33000 | 1 | |
Tree-based ortholog | 1-to-1 | AL4G33000 | 1 | ||
Anchor point | 1-to-many | AL5G31330 AL4G33000 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G33000 | 1 | ||
Beta vulgaris | Tree-based ortholog | 1-to-many | BV0G65090 BV0G65030 BV0G08430 | 3 | |
Anchor point | 1-to-1 | BV0G65030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G08430 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR04G01360 BR04G26910 BR09G40130 | 3 | |
Tree-based ortholog | 1-to-many | BR04G26910 BR07G15540 | 2 | ||
Anchor point | 1-to-many | BR09G40130 BR04G26910 BR04G01360 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G22220 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_005G25950 | 1 | |
Tree-based ortholog | 1-to-1 | CRU_004G26780 | 1 | ||
Anchor point | 1-to-many | CRU_005G25950 CRU_004G26780 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G25950 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00049G01480 | 1 | |
Tree-based ortholog | 1-to-1 | CP00049G01470 | 1 | ||
Anchor point | 1-to-many | CP00049G01470 CP00029G01460 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00049G01480 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR03G12020 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G12020 | 1 | ||
Citrullus lanatus | Tree-based ortholog | 1-to-many | CL06G02610 CL01G03850 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G03850 | 1 | ||
Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00001G01320 | 1 | |
Anchor point | 1-to-1 | CS00001G01320 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00053G00630 | 1 | ||
Cucumis melo | Tree-based ortholog | 1-to-many | CM00047G00100 CM00005G05020 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00005G05020 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0004G20680 | 1 | |
Tree-based ortholog | 1-to-1 | EG0004G20680 | 1 | ||
Anchor point | 1-to-many | EG0004G20550 EG0005G03890 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0004G20680 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV7G12000 | 1 | |
Tree-based ortholog | 1-to-1 | FV7G12000 | 1 | ||
Anchor point | 1-to-1 | FV7G11870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G12000 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G33220 GM03G03800 | 2 | |
Tree-based ortholog | 1-to-many | GM03G03800 GM01G33220 | 2 | ||
Anchor point | 1-to-many | GM17G15010 GM11G03480 GM03G03800 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM03G03800 GM01G33220 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR04G04010 | 1 | |
Tree-based ortholog | 1-to-many | GR08G10620 GR04G16380 GR04G04010 ... | 4 | ||
Anchor point | 1-to-many | GR08G10620 GR03G17080 GR04G16380 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR04G04010 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-many | LJ2G034720 LJ2G034690 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G034720 | 1 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD00G306840 | 1 | |
Tree-based ortholog | 1-to-many | MD17G005030 MD00G306840 MD00G494200 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G306840 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME08265G04940 | 1 | |
Tree-based ortholog | 1-to-1 | ME11341G00040 | 1 | ||
Anchor point | 1-to-many | ME11581G00390 ME08265G04940 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME08265G04940 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT4G027050 | 1 | |
Tree-based ortholog | 1-to-1 | MT4G027050 | 1 | ||
Anchor point | 1-to-many | MT4G026540 MT5G012420 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G027050 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS08G06020 | 1 | |
Tree-based ortholog | 1-to-1 | OS04G45190 | 1 | ||
Anchor point | 1-to-many | OS02G44300 OS04G46780 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS08G06020 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL03G03140 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL03G03140 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00010G00920 PP00044G01680 PP00274G00260 | 3 | |
Tree-based ortholog | 1-to-many | PP00044G01680 PP00274G00260 PP00010G00920 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00010G00920 PP00044G01680 PP00274G00260 | 3 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT02G14400 PT14G06090 | 2 | |
Tree-based ortholog | 1-to-many | PT14G06090 PT02G14400 | 2 | ||
Anchor point | 1-to-many | PT14G05950 PT02G14400 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT02G14400 PT14G06090 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_002G13570 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_002G13570 | 1 | ||
Anchor point | 1-to-1 | PPE_002G13570 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G13570 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30174G00800 | 1 | |
Tree-based ortholog | 1-to-1 | RC30174G00800 | 1 | ||
Anchor point | 1-to-1 | RC30174G00800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30174G00800 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G090910 SL10G018350 | 2 | |
Tree-based ortholog | 1-to-many | SL10G018350 SL01G090910 | 2 | ||
Anchor point | 1-to-many | SL08G078690 SL01G090910 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G018350 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST01G030060 | 1 | |
Tree-based ortholog | 1-to-1 | ST08G005340 | 1 | ||
Anchor point | 1-to-many | ST01G030060 ST08G024490 ST08G005340 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G030060 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP4G27200 TP5G02630 | 2 | |
Tree-based ortholog | 1-to-1 | TP4G27200 | 1 | ||
Anchor point | 1-to-many | TP5G02630 TP4G27200 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G27200 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0001G37840 | 1 | |
Tree-based ortholog | 1-to-1 | TC0001G37840 | 1 | ||
Anchor point | 1-to-1 | TC0001G37680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G37840 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV15G09430 | 1 | |
Tree-based ortholog | 1-to-1 | VV15G09430 | 1 | ||
Anchor point | 1-to-many | VV15G09430 VV02G00450 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV15G09430 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-many | ZM10G10410 ZM05G34910 ZM06G09660 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM04G07590 | 1 |