Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT2G39990
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT2G39990 | 1 |  |
| Tree-based ortholog | AT2G39990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT2G39990 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00077G01120 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00077G01120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00077G01120 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-many | AL0G10470 AL4G26620 | 2 | |
| Tree-based ortholog | 1-to-many | AL4G26620 AL0G10470 | 2 | ||
| Anchor point | N/A | AL4G26620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | AL4G26620 AL0G10470 | 2 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV7G05300 | 1 | |
| Tree-based ortholog | 1-to-1 | BV7G05300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G05300 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR03G20050 BR05G05840 | 2 | |
| Tree-based ortholog | 1-to-many | BR05G05840 BR03G20050 | 2 | ||
| Anchor point | N/A | BR03G20050 BR05G05840 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G20050 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_004G21410 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_004G21410 | 1 | ||
| Anchor point | N/A | CRU_004G21410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G21410 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00019G01990 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00019G01990 | 1 | ||
| Anchor point | N/A | CP00019G01990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00019G01990 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | 1-to-1 | CR16G02770 | 1 | |
| Tree-based ortholog | 1-to-1 | CR16G02770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR16G02770 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL11G01020 | 1 | |
| Tree-based ortholog | 1-to-1 | CL11G01020 | 1 | ||
| Anchor point | N/A | CL11G01020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G01020 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00021G00960 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00021G00960 | 1 | ||
| Anchor point | N/A | CS00021G00960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00021G00960 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00008G02310 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00008G02310 | 1 | ||
| Anchor point | N/A | CM00008G02310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00008G02310 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-many | EG0002G13760 EG0002G16550 | 2 | |
| Tree-based ortholog | 1-to-many | EG0002G16550 EG0002G13760 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0002G13760 EG0002G16550 | 2 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV7G29020 | 1 | |
| Tree-based ortholog | 1-to-1 | FV7G29020 | 1 | ||
| Anchor point | N/A | FV7G29020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G29020 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM02G42210 GM11G35020 GM14G06690 ... | 4 | |
| Tree-based ortholog | 1-to-many | GM11G35020 GM18G03340 GM02G42210 ... | 4 | ||
| Anchor point | N/A | GM02G42210 GM14G06690 GM11G35020 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM11G35020 GM18G03340 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR11G28310 GR13G01940 | 2 | |
| Tree-based ortholog | 1-to-many | GR13G01940 GR11G28310 | 2 | ||
| Anchor point | N/A | GR11G28310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR13G01940 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ4G044150 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G044150 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD14G016860 MD14G016900 | 2 | |
| Tree-based ortholog | 1-to-many | MD14G016860 MD14G016900 | 2 | ||
| Anchor point | N/A | MD14G016860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD14G016900 MD14G016860 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME08265G02980 ME08265G03000 | 2 | |
| Tree-based ortholog | 1-to-many | ME08265G02980 ME08265G03000 ME12439G00100 | 3 | ||
| Anchor point | N/A | ME08265G02980 ME12439G00100 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME08265G02980 ME08265G03000 | 2 | ||
| Medicago truncatula | Orthologous gene family | 1-to-many | MT3G070190 MT5G082000 | 2 | |
| Tree-based ortholog | 1-to-many | MT3G070190 MT5G082000 | 2 | ||
| Anchor point | N/A | MT5G082000 MT3G070190 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT5G082000 MT3G070190 | 2 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS05G01450 | 1 | |
| Tree-based ortholog | 1-to-1 | OS05G01450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G01450 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | 1-to-1 | OL02G00490 | 1 | |
| Tree-based ortholog | 1-to-1 | OL02G00490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL02G00490 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-many | PP00031G01970 PP00311G00270 | 2 | |
| Tree-based ortholog | 1-to-many | PP00031G01970 PP00311G00270 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00311G00270 PP00031G01970 | 2 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT10G19200 | 1 | |
| Tree-based ortholog | 1-to-many | PT08G06550 PT10G19200 | 2 | ||
| Anchor point | N/A | PT08G06550 PT10G19200 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT10G19200 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_002G23750 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_002G23750 | 1 | ||
| Anchor point | N/A | PPE_002G23750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G23750 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29669G00150 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29669G00150 | 1 | ||
| Anchor point | N/A | RC29669G00150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29669G00150 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL11G013440 | 1 | |
| Tree-based ortholog | 1-to-many | SL05G052690 SL11G013440 | 2 | ||
| Anchor point | N/A | SL05G052690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL11G013440 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-many | ST05G025340 ST11G014050 | 2 | |
| Tree-based ortholog | 1-to-many | ST05G025340 ST11G014050 | 2 | ||
| Anchor point | N/A | ST05G025340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST11G014050 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP4G22300 | 1 | |
| Tree-based ortholog | 1-to-1 | TP4G22300 | 1 | ||
| Anchor point | N/A | TP4G22300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G22300 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-many | TC0004G29860 TC0010G02380 | 2 | |
| Tree-based ortholog | 1-to-many | TC0004G29860 TC0010G02380 | 2 | ||
| Anchor point | N/A | TC0010G02380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0010G02380 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV13G03830 | 1 | |
| Tree-based ortholog | 1-to-1 | VV13G03830 | 1 | ||
| Anchor point | N/A | VV13G03830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G03830 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM08G21800 | 1 | |
| Tree-based ortholog | 1-to-many | ZM08G21800 ZM06G05740 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G21800 | 1 |