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Integrative Orthology Viewer:
AT2G39770
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT2G39770 AT3G55590 | 2 |  |
| Tree-based ortholog | AT2G39770 | 1 | ||
| Anchor point | AT3G55590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT2G39770 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00012G03310 | 1 | |
| Tree-based ortholog | 1-to-many | ATR_00012G03280 ATR_00012G03310 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00012G03280 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL4G26310 | 1 | |
| Tree-based ortholog | 1-to-1 | AL4G26310 | 1 | ||
| Anchor point | 1-to-many | AL5G25740 AL4G26310 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G26310 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV2G05890 | 1 | |
| Tree-based ortholog | 1-to-1 | BV2G05890 | 1 | ||
| Anchor point | 1-to-1 | BV2G05890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G05890 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR03G25680 BR03G51730 BR05G06030 | 3 | |
| Tree-based ortholog | 1-to-many | BR03G19970 BR04G23640 BR05G06030 | 3 | ||
| Anchor point | 1-to-many | BR03G19970 BR05G06030 BR04G23640 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR03G19970 BR04G23640 | 2 | ||
| Capsella rubella | Tree-based ortholog | 1-to-1 | CRU_004G21140 | 1 | |
| Anchor point | 1-to-1 | CRU_004G21140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G21140 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00033G01450 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00454G00010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00454G00010 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR16G10870 | 1 | |
| Tree-based ortholog | 1-to-1 | CR16G10870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR16G10870 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL11G00730 | 1 | |
| Anchor point | 1-to-1 | CL11G00730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G00730 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00280G00120 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00021G01440 | 1 | ||
| Anchor point | 1-to-1 | CS00021G01440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00021G01440 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00008G01840 | 1 | |
| Anchor point | 1-to-1 | CM00008G01840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00008G01840 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0007G23700 | 1 | |
| Anchor point | 1-to-1 | EG0007G23700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G23700 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV7G28250 | 1 | |
| Anchor point | 1-to-1 | FV7G28250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G28250 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM14G07150 GM02G41820 GM11G34550 ... | 4 | |
| Anchor point | 1-to-many | GM11G34525 GM14G07150 GM02G41820 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM11G34550 GM18G03840 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR12G07280 | 1 | |
| Tree-based ortholog | 1-to-many | GR11G26910 GR12G07280 | 2 | ||
| Anchor point | 1-to-many | GR12G10690 GR11G26910 GR12G07280 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR11G26910 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G016190 | 1 | |
| Malus domestica | Tree-based ortholog | 1-to-many | MD00G034900 MD01G012770 | 2 | |
| Anchor point | 1-to-many | MD00G034900 MD01G012770 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G034900 MD01G012770 | 2 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-many | ME08910G00100 ME08265G02430 | 2 | |
| Anchor point | 1-to-many | ME08265G02430 ME08910G00100 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME08265G02430 ME08910G00100 | 2 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-1 | MT3G069070 | 1 | |
| Anchor point | 1-to-many | MT5G080770 MT3G069070 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G080770 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G62840 OS03G16150 OS08G13930 | 3 | |
| Tree-based ortholog | 1-to-many | OS03G16150 OS08G13930 OS01G62840 | 3 | ||
| Anchor point | 1-to-many | OS01G62840 OS03G16150 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G16150 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00114G01180 PP00323G00060 | 2 | |
| Tree-based ortholog | 1-to-many | PP00323G00060 PP00114G01180 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00114G01180 PP00323G00060 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-1 | PT08G00670 | 1 | |
| Tree-based ortholog | 1-to-many | PT10G19880 PT08G06010 PT08G00670 | 3 | ||
| Anchor point | 1-to-many | PT08G06010 PT10G19880 PT06G09030 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT08G06010 PT10G19880 | 2 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_002G23150 | 1 | |
| Anchor point | 1-to-1 | PPE_002G23150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G23150 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC29852G00030 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30143G00280 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL09G011220 | 1 | |
| Tree-based ortholog | 1-to-many | SL06G051270 SL03G096730 | 2 | ||
| Anchor point | 1-to-1 | SL09G011220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G096730 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-many | ST06G014260 ST03G019540 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G019540 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP5G06890 | 1 | |
| Tree-based ortholog | 1-to-1 | TP4G22060 | 1 | ||
| Anchor point | 1-to-many | TP5G06890 TP4G22060 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G22060 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0010G03290 | 1 | |
| Anchor point | 1-to-1 | TC0005G03130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0010G03290 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV13G04690 | 1 | |
| Anchor point | 1-to-1 | VV13G04690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G04690 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM01G10970 | 1 | |
| Tree-based ortholog | 1-to-many | ZM01G10970 ZM08G31930 ZM03G27000 | 3 | ||
| Anchor point | 1-to-1 | ZM01G10970 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM08G31930 ZM03G27000 | 2 |