Integrative Orthology Viewer: AT2G37180 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT2G37170 AT2G37180 AT3G53420 ... | 4 | |
Tree-based ortholog | AT2G37180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT2G37180 AT2G37170 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-many | ATR_00155G00350 ATR_00148G00090 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00148G00090 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL4G22820 AL5G23400 AL8G26800 | 3 | |
Tree-based ortholog | 1-to-many | AL4G22830 AL4G22820 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL4G22820 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV9G11920 | 1 | |
Tree-based ortholog | 1-to-1 | BV7G14070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV9G11920 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR02G11510 BR03G09860 BR03G18340 ... | 5 | |
Tree-based ortholog | 1-to-many | BR05G08030 BR03G18340 BR05G08040 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR03G18350 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_004G18470 CRU_004G18480 CRU_005G18770 ... | 4 | |
Tree-based ortholog | 1-to-1 | CRU_004G18470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_004G18470 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00102G00070 | 1 | |
Tree-based ortholog | 1-to-1 | CP00102G00070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00102G00070 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR12G15220 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR12G15220 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL02G21270 CL05G22120 | 2 | |
Tree-based ortholog | 1-to-many | CL04G08850 CL10G18330 CL04G08800 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL04G08830 | 1 | ||
Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00688G00010 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00014G02210 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00016G07740 | 1 | |
Tree-based ortholog | 1-to-many | CM00022G00400 CM00011G02640 CM00022G00460 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00022G00410 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G20150 EG0002G20160 EG0011G27330 | 3 | |
Tree-based ortholog | 1-to-1 | EG0001G09310 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | EG0002G20160 EG0002G20150 | 2 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV7G23860 | 1 | |
Tree-based ortholog | 1-to-1 | FV2G43190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | FV6G48730 FV6G48760 FV6G48740 | 3 | ||
Glycine max | Tree-based ortholog | 1-to-many | GM20G32005 GM10G35521 GM03G33803 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GM04G00450 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR02G24840 GR03G14160 GR04G00140 ... | 7 | |
Tree-based ortholog | 1-to-many | GR06G16680 GR09G41810 GR02G24840 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GR09G41810 GR02G24840 GR06G16680 | 3 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ1G064100 | 1 | |
Tree-based ortholog | 1-to-1 | LJ1G064100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ1G064100 | 1 | ||
Malus domestica | Tree-based ortholog | 1-to-1 | MD03G008930 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD14G016870 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME02960G00680 ME03750G01080 ME04616G00070 ... | 5 | |
Tree-based ortholog | 1-to-many | ME03750G01080 ME06327G00130 ME02960G00680 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME10919G00010 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT7G101190 | 1 | |
Tree-based ortholog | 1-to-1 | MT7G101190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT7G101190 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS04G44060 OS07G26660 OS07G26690 | 3 | |
Tree-based ortholog | 1-to-many | OS07G26640 OS07G26630 OS07G26660 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS04G44060 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL12G00450 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL12G00450 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00001G02500 PP00102G00520 PP00305G00060 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00118G01050 PP00118G01040 PP00008G00840 ... | 5 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT06G12800 PT06G12820 PT09G01390 ... | 4 | |
Tree-based ortholog | 1-to-many | PT06G12800 PT06G12820 PT16G08950 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT06G12800 PT06G12820 | 2 | ||
Prunus persica | Tree-based ortholog | 1-to-many | PPE_006G10010 PPE_006G24560 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_006G24560 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC28076G00020 RC30078G01280 | 2 | |
Tree-based ortholog | 1-to-many | RC28076G00020 RC30078G01280 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30078G01280 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL06G011350 SL10G084120 SL11G069430 | 3 | |
Tree-based ortholog | 1-to-many | SL10G084120 SL09G007770 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL06G011350 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST06G012350 | 1 | |
Tree-based ortholog | 1-to-1 | ST10G024870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST06G012350 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP4G19480 TP4G19490 TP5G08920 | 3 | |
Tree-based ortholog | 1-to-1 | TP4G19490 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | TP4G19490 TP4G19480 | 2 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0005G05730 TC0009G33470 | 2 | |
Tree-based ortholog | 1-to-1 | TC0005G05730 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0005G05730 | 1 | ||
Vitis vinifera | Tree-based ortholog | 1-to-1 | VV08G02850 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV06G05380 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM02G09850 ZM04G19230 ZM05G36360 | 3 | |
Tree-based ortholog | 1-to-many | ZM07G07680 ZM02G28060 ZM02G09850 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM04G19230 ZM02G09850 ZM05G36360 | 3 |