Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT2G36320
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT2G36320 | 1 |  |
| Tree-based ortholog | AT2G36320 | 1 | ||
| Anchor point | AT3G52800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT2G36320 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00040G01200 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00041G00040 | 1 | ||
| Anchor point | 1-to-1 | ATR_00040G01200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00040G01200 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL4G21740 | 1 | |
| Tree-based ortholog | 1-to-1 | AL4G21740 | 1 | ||
| Anchor point | 1-to-many | AL5G22730 AL4G21740 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G21740 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV7G12310 | 1 | |
| Tree-based ortholog | 1-to-1 | BV7G12310 | 1 | ||
| Anchor point | 1-to-1 | BV7G12310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G12310 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR06G09700 BR09G34170 | 2 | |
| Tree-based ortholog | 1-to-1 | BR03G17930 | 1 | ||
| Anchor point | 1-to-many | BR03G17930 BR02G01480 BR09G34170 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G34170 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_004G17500 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_004G17500 | 1 | ||
| Anchor point | 1-to-many | CRU_005G18130 CRU_004G17500 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G17500 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00005G00390 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00032G00890 | 1 | ||
| Anchor point | 1-to-1 | CP00005G00390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00005G00390 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR09G01740 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR09G01740 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL04G09860 | 1 | |
| Tree-based ortholog | 1-to-1 | CL02G22250 | 1 | ||
| Anchor point | 1-to-1 | CL04G09860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G22250 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00056G00730 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00056G00730 | 1 | ||
| Anchor point | 1-to-1 | CS00056G00730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00056G00730 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00068G00850 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00047G02930 | 1 | ||
| Anchor point | 1-to-1 | CM00068G00850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00068G00850 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0002G32530 | 1 | |
| Anchor point | 1-to-1 | EG0002G32530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G32530 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-many | FV1G23590 FV6G18510 | 2 | |
| Tree-based ortholog | 1-to-many | FV2G01740 FV2G44220 | 2 | ||
| Anchor point | 1-to-1 | FV6G18510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | FV6G18510 FV1G23590 | 2 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM03G35180 GM19G37840 | 2 | |
| Tree-based ortholog | 1-to-many | GM12G30920 GM18G49010 | 2 | ||
| Anchor point | 1-to-many | GM19G37840 GM12G30920 GM03G35180 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM19G37840 GM03G35180 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR02G24090 GR06G15620 GR09G40470 | 3 | |
| Tree-based ortholog | 1-to-many | GR01G12150 GR13G25840 GR09G08650 | 3 | ||
| Anchor point | 1-to-many | GR01G12150 GR02G24090 GR09G40470 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G40470 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ3G042670 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G042670 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD00G006990 MD00G106690 MD00G216660 ... | 4 | |
| Tree-based ortholog | 1-to-many | MD09G023500 MD08G014050 MD00G451050 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G006990 MD04G006860 MD00G106690 | 3 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME01664G00170 ME06550G00650 | 2 | |
| Tree-based ortholog | 1-to-1 | ME05859G00620 | 1 | ||
| Anchor point | 1-to-many | ME06550G00650 ME01664G00170 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME06550G00650 ME01664G00170 | 2 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT7G104320 | 1 | |
| Tree-based ortholog | 1-to-1 | MT1G060380 | 1 | ||
| Anchor point | 1-to-many | MT1G060380 MT7G104320 MT2G086190 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G104320 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS02G32840 OS01G56040 | 2 | |
| Anchor point | 1-to-1 | OS02G32840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS06G41010 OS02G10200 | 2 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00252G00080 PP00023G00300 PP00023G00310 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00252G00080 PP00023G00310 PP00050G00520 ... | 4 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT09G14410 PT04G18430 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT06G05650 PT16G05170 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_007G13570 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_006G12580 | 1 | ||
| Anchor point | 1-to-1 | PPE_007G13570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G13570 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29625G00060 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30055G00090 | 1 | ||
| Anchor point | 1-to-1 | RC29625G00060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29625G00060 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL10G083460 | 1 | |
| Tree-based ortholog | 1-to-many | SL09G009590 SL10G083460 | 2 | ||
| Anchor point | 1-to-many | SL10G083460 SL09G009590 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G083460 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST10G025720 | 1 | |
| Tree-based ortholog | 1-to-many | ST11G011630 ST09G010540 ST10G025720 | 3 | ||
| Anchor point | 1-to-many | ST11G011630 ST10G025720 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G025720 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-many | TP4G18560 TP5G09530 | 2 | |
| Tree-based ortholog | 1-to-1 | TP4G18560 | 1 | ||
| Anchor point | 1-to-many | TP4G18560 TP5G09530 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G18560 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0005G08290 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0009G28100 | 1 | ||
| Anchor point | 1-to-1 | TC0005G08290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G08290 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV16G03440 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G07910 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-1 | ZM04G15730 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM05G23560 ZM09G00120 ZM04G38190 | 3 |